RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BICRALQ6AI39 1079 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF367Q7RTV3 350 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF524Q96C55 264 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SIGLEC11Q96RL6 698 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 NMNAT3Q96T66 252 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 STACQ99469 402 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 VN1R1Q9GZP7 353 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 PRO3102Q9H379 93 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 IFT46Q9NQC8 304 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 COMMD3Q9UBI1 195 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SSR3Q9UNL2 185 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 CLDN16Q9Y5I7 305 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 DAPL1A0PJW8 107 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ARRDC5A6NEK1 342 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 LAMTOR5O43504 91 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ALOX12BO75342 701 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 F8A1P23610 371 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 RPS5P46782 204 aaKnown RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SPATC1Q76KD6 591 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 GJD3Q8N144 294 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TBL1XR1Q9BZK7 514 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SEC14L4Q9UDX3 406 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 LRP4O75096 1905 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 hCG_1809904A0A1W2PP81 198 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 A0A1W2PPE2 198 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 A0A1W2PR64 198 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 FAM86C2PA6NEL3 165 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 SERINC4A6NH21 518 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 SHISA8B8ZZ34 492 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 MCIDASD6RGH6 385 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 NUDT21O43809 227 aaKnown RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 DLGAP3O95886 979 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 PLCXD2Q0VAA5 305 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 SYT9Q86SS6 491 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 RFLNBQ8N5W9 214 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 TRUB1Q8WWH5 349 aaKnown RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ORAI1Q96D31 301 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 CDCA4Q9BXL8 241 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM185BQ9H7F4 350 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 CNOT2Q9NZN8 540 aaKnown RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 VDAC3Q9Y277 283 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 CASKO14936 926 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 UTS2O95399 124 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 GPANK1O95872 356 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 THBS1P07996 1170 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 AQP2P41181 271 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ACAA2P42765 397 aaKnown RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 CAMLGP49069 296 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ZMAT1Q5H9K5 638 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 PWWP2BQ6NUJ5 590 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 NANOGP1Q8N7R0 232 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 POC5Q8NA72 575 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 CPEB3Q8NE35 698 aaKnown RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 KBTBD8Q8NFY9 601 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ZPLD1Q8TCW7 415 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 PRRG3Q9BZD7 231 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 SLC6A15Q9H2J7 730 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.86□□□□□ -0.83
NEDD9-201ENST00000379433 COPS7AQ9UBW8 275 aa9.86□□□□□ -0.83
NEDD9-201ENST00000379433 HIST1H1CP16403 213 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 ACVR2AP27037 513 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PYCR1P32322 319 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SLC1A3P43003 542 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 MEOX2P50222 304 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 WNT4P56705 351 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF846Q147U1 533 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 KLHL22Q53GT1 634 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 AKIRIN2Q53H80 203 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TRIM61Q5EBN2 209 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PRAMEF8Q5VWM4 474 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 PRAMEF7Q5VXH5 474 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 OR6Q1Q8NGQ2 317 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 OR13C5Q8NGS8 318 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 STT3BQ8TCJ2 826 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 G6PC3Q9BUM1 346 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SF3B5Q9BWJ5 86 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 GALNT9Q9HCQ5 603 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TAS2R3Q9NYW6 316 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 DMXL1Q9Y485 3027 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 CEP192Q8TEP8 1941 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 CUL9Q8IWT3 2517 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 A0A1W2PQM1 296 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 hCG_1807616A0A1W2PRN6 198 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SCRG1O75711 98 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 RPP14O95059 124 aaKnown RBP9.85□□□□□ -0.83
NEDD9-201ENST00000379433 LIMS3P0CW19 117 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 LIMS4P0CW20 117 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 GIMD1P0DJR0 217 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 RORAP35398 523 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 GABRA4P48169 554 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 SLC37A1P57057 533 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 GALK2Q01415 458 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 CLN3Q13286 438 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 TP53I3Q53FA7 332 aa9.85□□□□□ -0.83
NEDD9-201ENST00000379433 KLHL26Q53HC5 615 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms