RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 RAB3CQ96E17 227 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 PRRT1Q99946 306 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 EMC6Q9BV81 110 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF71Q9NQZ8 489 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-202ENST00000378182 MKS1Q9NXB0 559 aa13.06□□□□□ -0.32
TRIM13-202ENST00000378182 LINC01565O15544 149 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 KCNJ10P78508 379 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 PRTGQ2VWP7 1150 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 GLYR1Q49A26 553 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 FCRLAQ7L513 359 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ELMOD3Q96FG2 381 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 PRELID1Q9Y255 219 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 RASD1Q9Y272 281 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 LOXL2Q9Y4K0 774 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 PLAC9Q5JTB6 97 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 FYTTD1Q96QD9 318 aaKnown RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 THAP7Q9BT49 309 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 MKRN2OSH3BPM6 223 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 OR2J3O76001 311 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 TAS2R46P59540 309 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ANKRD19PQ9H560 264 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 HEYLQ9NQ87 328 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 A0A1B0GX78 115 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF487B1APH4 448 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 GPR137BO60478 399 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ARL6IP1Q15041 203 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 CPNE4Q96A23 557 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 LIN7BQ9HAP6 207 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 NXT1Q9UKK6 140 aaKnown RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 UBE2IP63279 158 aaKnown RBP13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ZNF74Q16587 644 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ADGRF3Q8IZF5 1079 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 ASB17Q8WXJ9 295 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 PDXPQ96GD0 296 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 REEP6Q96HR9 211 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 PPT2Q9UMR5 302 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 NID2Q14112 1375 aa13.05□□□□□ -0.32
TRIM13-202ENST00000378182 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CDK4P11802 303 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 TAS2R30P59541 319 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 OR52N5Q8NH56 324 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 BARHL1Q9BZE3 327 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 ZMAT3Q9HA38 289 aaKnown RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 MRPL22Q9NWU5 206 aaKnown RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 NUDT19A8MXV4 375 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 FLI1Q01543 452 aaPredicted RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CST9Q5W186 159 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 SYT9Q86SS6 491 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 ADGRG5Q8IZF4 528 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 SERINC4A6NH21 518 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 SEC14L6B5MCN3 397 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 EIF2DP41214 584 aaKnown RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 HBA1P69905 142 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CATSPERDQ86XM0 798 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 DEFB124Q8NES8 71 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 OR13C9Q8NGT0 318 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 FAM174AQ8TBP5 190 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 TSSK2Q96PF2 358 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 GPR173Q9NS66 373 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 ABCD4O14678 606 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CTRB1P17538 263 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 PRKACBP22694 351 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 GIFP27352 417 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CLINT1Q14677 625 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CTRB2Q6GPI1 263 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 TNFRSF10AO00220 468 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 MAKP20794 623 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CD27P26842 260 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 MEF2DQ14814 521 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 DBX2Q6ZNG2 339 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 LHX3Q9UBR4 397 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 SIRPB1O00241 398 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CHRNB1P11230 501 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 TPT1P13693 172 aaKnown RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 AOAHP28039 575 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 EXOSC2Q13868 293 aaKnown RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 LEXMQ3ZCV2 418 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 PM20D1Q6GTS8 502 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 LILRA2Q8N149 483 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 CA5BP1Q8WTZ4 195 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 PHF7Q9BWX1 381 aaPredicted RBP13.04□□□□□ -0.32
TRIM13-202ENST00000378182 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
TRIM13-202ENST00000378182 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms