RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 RPP30P78346 268 aaKnown RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ARL6IP1Q15041 203 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 BOKQ9UMX3 212 aaPredicted RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 MT-CO2P00403 227 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ITGB2P05107 769 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 GIPRP48546 466 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 LGALS4P56470 323 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF750Q32MQ0 723 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 SIRT6Q8N6T7 355 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 OR9A4Q8NGU2 314 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 OR5K2Q8NHB8 316 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 GPR160Q9UJ42 338 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 K7EPK0 472 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 LPLP06858 475 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 NDUFA6P56556 154 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 RPS18P62269 152 aaKnown RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ARHGAP19Q14CB8 494 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 KCNIP4Q6PIL6 250 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 CPXM2Q8N436 756 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 FAM71E2Q8N5Q1 922 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 VN1R2Q8NFZ6 395 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 UBTD2Q8WUN7 234 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ASB17Q8WXJ9 295 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ST8SIA2Q92186 375 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 GHSRQ92847 366 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 TNFRSF13CQ96RJ3 184 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 INSM2Q96T92 566 aaPredicted RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 CXorf36Q9H7Y0 433 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 PMP2P02689 132 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 PSMB1P20618 241 aaKnown RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 Q6ZSR9 355 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC35D2Q76EJ3 337 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 A4GALTQ9NPC4 353 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ANKRD30BLA7E2S9 258 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 LGALS8O00214 317 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 EDIL3O43854 480 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 SUSD5O60279 629 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 RPA2P15927 270 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 EMP3P54852 163 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 NIPAL3Q6P499 406 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 C6orf15Q6UXA7 325 aaPredicted RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 OLIG3Q7RTU3 272 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 HSD17B8Q92506 261 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 MRPS2Q9Y399 296 aaKnown RBP11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 DPM1O60762 260 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 HOXD9P28356 352 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PKLRP30613 574 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TPMTP51580 245 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 CTU2Q2VPK5 515 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ELF4Q99607 663 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PDCD1LG2Q9BQ51 273 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SEC22CQ9BRL7 303 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 GFRA3O60609 400 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 CBR1P16152 277 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 GP2P55259 537 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 BPHLQ86WA6 291 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 FUNDC1Q8IVP5 155 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PIGCQ92535 297 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 MS4A4AQ96JQ5 239 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 MED18Q9BUE0 208 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC46A2Q9BY10 475 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ATP23Q9Y6H3 246 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 B4DXG7 233 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC16A6O15403 523 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 IMPA1P29218 277 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 RPS19P39019 145 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 EFNA3P52797 238 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TNFRSF17Q02223 184 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PRSS45Q7RTY3 260 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 OR6F1Q8NGZ6 308 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC6A20Q9NP91 592 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM72A0PK05 275 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 HTR3AP46098 478 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ILKQ13418 452 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PXDC1Q5TGL8 231 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 DHRS13Q6UX07 377 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 ENKD1Q9H0I2 346 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 PADI1Q9ULC6 663 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 M0QYG6 137 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 TIMM8AO60220 97 aaPredicted RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 CHRDQ9H2X0 955 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 NIPAL2Q9H841 368 aa11.09□□□□□ -0.63
PCDHA9-201ENST00000378122 NOX4Q9NPH5 578 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms