RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 METRNLQ641Q3 311 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 VASNQ6EMK4 673 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TMEM179BQ7Z7N9 219 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ZNF679Q8IYX0 411 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OR6M1Q8NGM8 313 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OR9A4Q8NGU2 314 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 KCNG3Q8TAE7 436 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SCARB1Q8WTV0 552 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC41A2Q96JW4 573 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SGPP1Q9BX95 441 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC25A31Q9H0C2 315 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LRFN1Q9P244 771 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 FBXL2Q9UKC9 423 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TTLL8A6PVC2 850 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 HIDE1A8MVS5 230 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 GLCEO94923 617 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 IGHG1P01857 330 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 GIPP09681 153 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 CALCBP10092 127 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 PVRP15151 417 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 POU3F3P20264 500 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 MAKP20794 623 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CLDN6P56747 220 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CLDN12P56749 244 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 FXYD4P59646 89 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CNN3Q15417 329 aaKnown RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 SOWAHCQ53LP3 525 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 ACSM5Q6NUN0 579 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 NDUFAF7Q7L592 441 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LILRA3Q8N6C8 439 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 FAM174AQ8TBP5 190 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 NEURL2Q9BR09 285 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 STRADBQ9C0K7 418 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 C20orf85Q9H1P6 137 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 PLEK2Q9NYT0 353 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LRIT2A6NDA9 550 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TMEM200CA6NKL6 621 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 F5H5K5 113 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ZNF593O00488 134 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 AGPAT2O15120 278 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 FZD6O60353 706 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 GPR137BO60478 399 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 C1QAP02745 245 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 TRHRP34981 398 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 SLC6A11P48066 632 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 CSNK1A1P48729 337 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 MELKQ14680 651 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 WDR88Q6ZMY6 472 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 ZNF620Q6ZNG0 422 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 RNF165Q6ZSG1 346 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 DPY19L4Q7Z388 723 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 MISPQ8IVT2 679 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 PRR22Q8IZ63 422 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 LILRB2Q8N423 598 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 WFDC5Q8TCV5 224 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 RNF141Q8WVD5 230 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OPALINQ96PE5 141 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 OR5B2Q96R09 309 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 NMNAT3Q96T66 252 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 DNTTIP1Q9H147 329 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 C1orf198Q9H425 327 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 FGF20Q9NP95 211 aaPredicted RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 CMC2Q9NRP2 79 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 DNMT3BQ9UBC3 853 aaKnown RBP7.75□□□□□ -1.17
VPS36-201ENST00000378060 STEAP1Q9UHE8 339 aa7.75□□□□□ -1.17
VPS36-201ENST00000378060 DOCK6Q96HP0 2047 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 NUP214P35658 2090 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 HMGN4O00479 90 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 BRINP1O60477 761 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 GJA4P35212 333 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ALDH3B1P43353 468 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TNK1Q13470 666 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 DYRK1AQ13627 763 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ANKRD34AQ69YU3 496 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ZNF100Q8IYN0 542 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ESX1Q8N693 406 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 NKAIN3Q8N8D7 197 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TCTN2Q96GX1 697 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 CRB3Q9BUF7 120 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 RNF167Q9H6Y7 350 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 PLAC1Q9HBJ0 212 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 FAM212BQ9NTI7 297 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 TRAPPC4Q9Y296 219 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 LOC102725191A0A1B0GVB3 256 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 POM121CA8CG34 1229 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 FADS1O60427 444 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 VASPP50552 380 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 CCR6P51684 374 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 NKX6-1P78426 367 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 DPTQ07507 201 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 RIN1Q13671 783 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 IHHQ14623 411 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 SLC22A25Q6T423 547 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 RBM45Q8IUH3 476 aaKnown RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 SYS1Q8N2H4 156 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 PXT1Q8NFP0 134 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 OR4K15Q8NH41 348 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 PHOSPHO2Q8TCD6 241 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 PKMYT1Q99640 499 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms