RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 HRH4Q9H3N8 390 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 FBXL4Q9UKA2 621 aa8.09□□□□□ -1.11
PCDH9-202ENST00000377865 LTBP1Q14766 1721 aa8.09□□□□□ -1.12
PCDH9-202ENST00000377865 DIRAS3O95661 229 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 DOC2BQ14184 412 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF79Q15937 498 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FRMD1Q8N878 549 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ANKRD53Q8N9V6 530 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TEX19Q8NA77 164 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OR4K15Q8NH41 348 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SLC41A2Q96JW4 573 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 GAREM1Q9H706 876 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 C1orf123Q9NWV4 160 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 PPP4R1LQ9P1A2 415 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 WIF1Q9Y5W5 379 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 NUP205Q92621 2012 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 PRSS44E7EML9 344 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 MPIG6BO95866 241 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 BDKRB2P30411 391 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 VASPP50552 380 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 MFGE8Q08431 387 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF750Q32MQ0 723 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FCRL6Q6DN72 434 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SLC39A5Q6ZMH5 540 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 UEVLDQ8IX04 471 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 BOLLQ8N9W6 283 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SUMF2Q8NBJ7 301 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 GPR32P1Q8NGA4 272 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OR51S1Q8NGJ8 323 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 GPR137Q96N19 417 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OR5B12Q96R08 314 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SDF2Q99470 211 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 BARHL1Q9BZE3 327 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 IL21RQ9HBE5 538 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 HCFC1R1Q9NWW0 138 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 PRELID3BQ9Y3B1 194 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FAM230AA0A1W2PPH8 454 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 A0A1W2PR48 441 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SCO1O75880 301 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SIX6O95475 246 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 CD14P08571 375 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SLC35E2P0CK97 266 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 HOXD11P31277 338 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 POU3F4P49335 361 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF674Q2M3X9 581 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 BEX5Q5H9J7 111 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OLIG3Q7RTU3 272 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 CPNE7Q9UBL6 633 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 KIR2DS5A0A0G2JLQ3 304 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 A0A0G2JNG1 304 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 KIR2DS3K7RE56 304 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 LIMS3P0CW19 117 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 LIMS4P0CW20 117 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 NTSR1P30989 418 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 EGR3Q06889 387 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 KIR2DS5Q14953 304 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FAM209AQ5JX71 171 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 AKR1C8PQ5T2L2 129 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TMEM225Q6GV28 225 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TMEM200AQ86VY9 491 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 LIX1LQ8IVB5 337 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SLC16A11Q8NCK7 471 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OR2AK2Q8NG84 335 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 OR4Q3Q8NH05 313 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FZD3Q9NPG1 666 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 FAM212BQ9NTI7 297 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 A0A0B4J2A0 478 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 C17orf105B2RV13 164 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TAAR5O14804 337 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 HNRNPA2B1P22626 353 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 P2RX1P51575 399 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SCAND1P57086 179 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 PCBP4P57723 403 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ERVFC1P60507 584 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 IFITM2Q01629 132 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 DUSP5Q16690 384 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ST3GAL2Q16842 350 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SLC25A35Q3KQZ1 300 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 PAPD4Q6PIY7 484 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZC3H14Q6PJT7 736 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 METTL27Q8N6F8 245 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 WDSUB1Q8N9V3 476 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 LINC01599Q8WXQ3 324 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 KLHDC7BQ96G42 594 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 AUNIPQ9H7T9 357 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 MRPS18AQ9NVS2 196 aaKnown RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF629Q9UEG4 869 aaPredicted RBP8.08□□□□□ -1.12
PCDH9-202ENST00000377865 SHPKQ9UHJ6 478 aa8.08□□□□□ -1.12
PCDH9-202ENST00000377865 TOR1AO14656 332 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 BCL2L11O43521 198 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 MAOBP27338 520 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 GNRHRP30968 328 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SPOCK1Q08629 439 aa8.07□□□□□ -1.12
PCDH9-202ENST00000377865 SNTB1Q13884 538 aaKnown RBP8.07□□□□□ -1.12
PCDH9-202ENST00000377865 MPPED2Q15777 294 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms