RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 ARL4DP49703 201 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 MAT1AQ00266 395 aaKnown RBP13.39□□□□□ -0.27
UBA1-202ENST00000377269 SLC9A5Q14940 896 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 TRAM1Q15629 374 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 ZNF626Q68DY1 528 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 SLC41A2Q96JW4 573 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 ZNF768Q9H5H4 540 aaKnown RBP13.39□□□□□ -0.27
UBA1-202ENST00000377269 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 MED17Q9NVC6 651 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 SEC16AO15027 2179 aa13.39□□□□□ -0.27
UBA1-202ENST00000377269 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 FLRT2O43155 660 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 CREBL2O60519 120 aaPredicted RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 SC5DO75845 299 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 MECP2P51608 486 aaKnown RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 TSPAN31Q12999 210 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 RUNX2Q13950 521 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 PRTGQ2VWP7 1150 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 SLC25A25Q6KCM7 469 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 PRSS45Q7RTY3 260 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 TMEM17Q86X19 198 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 TEX19Q8NA77 164 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 BPIFCQ8NFQ6 507 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 OR9A4Q8NGU2 314 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 OR6K3Q8NGY3 331 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 AUNIPQ9H7T9 357 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 SEMA5BQ9P283 1151 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 NCDNQ9UBB6 729 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 ZNF69Q9UC07 566 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 OPN4Q9UHM6 478 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 ADAM29Q9UKF5 820 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 A0A1W2PS29 197 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 PRAMEF2O60811 474 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 RAB3BP20337 219 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 ATP6V1E1P36543 226 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 RFC3P40938 356 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 CLDN6P56747 220 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 SQSTM1Q13501 440 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 CEACAM19Q7Z692 300 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 D2HGDHQ8N465 521 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 OR4D9Q8NGE8 314 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 RAB8BQ92930 207 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 PRRC1Q96M27 445 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 BARX1Q9HBU1 254 aaPredicted RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 GPN1Q9HCN4 374 aaPredicted RBP13.38□□□□□ -0.27
UBA1-202ENST00000377269 TMEM9BQ9NQ34 198 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 CLEC4AQ9UMR7 237 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 RCE1Q9Y256 329 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
UBA1-202ENST00000377269 GVINP1Q7Z2Y8 2422 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 A0A087WUU8 490 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 A0A0A6YYC8 382 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 I3L1I5 382 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 HMGN4O00479 90 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 PLPP2O43688 288 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ATG12O94817 140 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ECDO95905 644 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 MTFR2Q6P444 385 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ABHD13Q7L211 337 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ACBD7Q8N6N7 88 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 SIRT6Q8N6T7 355 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 BBS1Q8NFJ9 593 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 OR1L3Q8NH93 324 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ABHD4Q8TB40 342 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 SLC22A8Q8TCC7 542 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 CCDC74BQ96LY2 380 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 NOX3Q9HBY0 568 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 MIEF1Q9NQG6 463 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 AKAP7Q9P0M2 348 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 TINAGQ9UJW2 476 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 PTPRZ1P23471 2315 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 H3BMH7 237 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 CDC123O75794 336 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 AIFM1O95831 613 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 GLAP06280 429 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 SNRPBP14678 240 aaKnown RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 PTGER1P34995 402 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 DUSP3P51452 185 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 MEX3DQ86XN8 651 aaKnown RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 OR5W2Q8NH69 310 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 ZNF285Q96NJ3 590 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 TRIM36Q9NQ86 728 aa13.37□□□□□ -0.27
UBA1-202ENST00000377269 TMEM184BQ9Y519 407 aaPredicted RBP13.37□□□□□ -0.27
UBA1-202ENST00000377269 URADA6NGE7 173 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 ZNF749O43361 778 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 FOXS1O43638 330 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 RDH16O75452 317 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 RLN2P04090 185 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 ATF1P18846 271 aa13.36□□□□□ -0.27
UBA1-202ENST00000377269 TBXA2RP21731 343 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms