RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SLC9B1P1A6NJY1 282 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 THBS1P07996 1170 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CPEB3Q8NE35 698 aaKnown RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CD200R1Q8TD46 325 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CPNE4Q96A23 557 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 NUDT9Q9BW91 350 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 PHF3Q92576 2039 aaKnown RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 SNAI1O95863 264 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 FCER1GP30273 86 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 C9orf135Q5VTT2 229 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ISG20Q96AZ6 181 aaKnown RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 DCLRE1CQ96SD1 692 aaKnown RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 NPAP1Q9NZP6 1156 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 MROH6A6NGR9 719 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 OPN1LWP04000 364 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CT45A10P0DMU9 189 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ISCA2Q86U28 154 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM25Q86YD3 366 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 OR4F15Q8NGB8 312 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 C1orf198Q9H425 327 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 C1orf105O95561 183 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CLINT1Q14677 625 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 FXNQ16595 210 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 PPP1R3BQ86XI6 285 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 PTTG3PQ9NZH4 202 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 GOLT1BQ9Y3E0 138 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 DCTP40126 519 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 CDKN3Q16667 212 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 PGGHGQ32M88 737 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF718Q3SXZ3 478 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ADIPOR2Q86V24 386 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 LILRB4Q8NHJ6 448 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 GON7Q9BXV9 100 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 NPIPB15A6NHN6 443 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF264O43296 627 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 NCR1O76036 304 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 GLB1P16278 677 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 TRHRP34981 398 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 MLLT11Q13015 90 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 M1APQ8TC57 530 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 HIST1H1TP22492 207 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 GNB1P62873 340 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 XYLT2Q9H1B5 865 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 METTL17Q9H7H0 456 aaPredicted RBP11.6□□□□□ -0.55
VPS13A-204ENST00000376634 HPNP05981 417 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 ADIRFQ15847 76 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 MEP1BQ16820 701 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 OR10J5Q8NHC4 309 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 LGALS14Q8TCE9 139 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 BOD1Q96IK1 185 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM235A6NFC5 223 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR52A4PA6NMU1 304 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 GABRPO00591 440 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 DHRS4L1P0CG22 281 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 GM2AP17900 193 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 AHRP35869 848 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 BMPR1AP36894 532 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 SLC10A2Q12908 348 aaPredicted RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PODNL1Q6PEZ8 512 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR13C2Q8NGS9 318 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR10R2Q8NGX6 335 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 H1FXQ92522 213 aaKnown RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR7D2Q96RA2 312 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 NUDT22Q9BRQ3 303 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 TM7SF3Q9NS93 570 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 EIF2DP41214 584 aaKnown RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PMPCAQ10713 525 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 TBC1D28Q2M2D7 210 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR52H1Q8NGJ2 320 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 DTD2Q96FN9 168 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PIGLQ9Y2B2 252 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 CACNG3O60359 315 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 TNFRSF4P43489 277 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 ENTHD1Q8IYW4 607 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PXT1Q8NFP0 134 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM43Q9BTV4 400 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 ZMAT5Q9UDW3 170 aaKnown RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 HEATR5AQ86XA9 2040 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 CMPK2Q5EBM0 449 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 C5orf46Q6UWT4 87 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR1M1Q8NGA1 313 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PGGT1BP53609 377 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms