RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 A0A1B0GW55 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TCRBV16S1A1N1A0A5B0 115 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 IFITM5A6NNB3 132 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 BHLHE40O14503 412 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 HCRTR1O43613 425 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 EGFP01133 1207 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NKAIN2Q5VXU1 208 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RNF113BQ8IZP6 322 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MED30Q96HR3 178 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MYADMQ96S97 322 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PITHD1Q9GZP4 211 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 WDR76Q9H967 626 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RAB3DO95716 219 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ITGA3P26006 1051 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CD276Q5ZPR3 534 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SAV1Q9H4B6 383 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CES1P1Q9UKY3 287 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NPFFR2Q9Y5X5 522 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 A0A1B0GV50 99 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ACOT7O00154 380 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 AGPAT2O15120 278 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TRIM3O75382 744 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 BTG1P62324 171 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NFATC4Q14934 902 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NSDHLQ15738 373 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SLC6A15Q9H2J7 730 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SPTBN2O15020 2390 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TPRP12270 2363 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MDC1Q14676 2089 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GIMD1P0DJR0 217 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 POU3F4P49335 361 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GSG1Q2KHT4 349 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CORO6Q6QEF8 472 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TMEM184AQ6ZMB5 413 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GLB1L2Q8IW92 636 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SPERTQ8NA61 448 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 OR51A4Q8NGJ6 313 aa13.16□□□□□ -0.3
TNFRSF1B-201ENST00000376259 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RHPN2P1A8MT19 583 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MYF5P13349 255 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 EIF2B1Q14232 305 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 C1QL3Q5VWW1 255 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RHOUQ7L0Q8 258 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 TOR1AIP2Q8NFQ8 470 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 C16orf52Q8NHV5 167 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 GPR148Q8TDV2 347 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 OR11A1Q9GZK7 315 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZNF350Q9GZX5 532 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DUSP22Q9NRW4 184 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 KCNG2Q9UJ96 466 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 F5H5P2 479 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PLPP2O43688 288 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PPM1BO75688 479 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SEMA4FO95754 770 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DCNP07585 359 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SLC2A1P11166 492 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PGAM2P15259 253 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 RBPMSQ93062 196 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 MOGAT1Q96PD6 335 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 PBX4Q9BYU1 374 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 OR10A5Q9H207 317 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms