RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 XRCC3O43542 346 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 GSK3AP49840 483 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 RAB5CP51148 216 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 MORN1Q5T089 497 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 HBMQ6B0K9 141 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 SSX9Q7RTT3 188 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 ENTHD1Q8IYW4 607 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 SLC6A18Q96N87 628 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 CDCP1Q9H5V8 836 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PIGLQ9Y2B2 252 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PHRF1Q9P1Y6 1649 aaKnown RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PDE4DIPQ5VU43 2346 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 AGAP14A8MT82 685 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 DPP4P27487 766 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 HACD4Q5VWC8 232 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 CMIPQ8IY22 773 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 ADAMTS14Q8WXS8 1223 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 REEP6Q96HR9 211 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PLK3Q9H4B4 646 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 C1orf123Q9NWV4 160 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 GPR160Q9UJ42 338 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 EIF3FO00303 357 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 TRAF3IP2O43734 574 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 PRKNO60260 465 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 CSO75390 466 aaKnown RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 MTHFD2P13995 350 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 SLC1A3P43003 542 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 EPHA5P54756 1037 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 DLX5P56178 289 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 ADIRFQ15847 76 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
COL4A1-201ENST00000375820 UBAC2Q8NBM4 344 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 RAB39BQ96DA2 213 aa12.69□□□□□ -0.38
COL4A1-201ENST00000375820 NRG2O14511 850 aaPredicted RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 SOCS7O14512 581 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 DDAH2O95865 285 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 CLEC2LP0C7M8 214 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 RAB38P57729 211 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ERVFC1P60507 584 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GPR85P60893 370 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 MRPL43Q8N983 215 aaKnown RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 HSD17B11Q8NBQ5 300 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GDE1Q9NZC3 331 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 P2RX6O15547 441 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ENPP1P22413 925 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GPR176Q14439 515 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 SLC46A3Q7Z3Q1 461 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 KLHDC9Q8NEP7 349 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 BPIFCQ8NFQ6 507 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GMLQ99445 158 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 CXCL16Q9H2A7 254 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GAREM1Q9H706 876 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 B4GALT3O60512 393 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF728P0DKX0 622 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 CDK4P11802 303 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 DCDP81605 110 aaKnown RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 CATR1Q13166 79 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 MFAP5Q13361 173 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 RPL22L1Q6P5R6 122 aaKnown RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 PGBD5Q8N414 524 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 POFUT1Q9H488 388 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 SIT1Q9Y3P8 196 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 SERINC4A6NH21 518 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 STMND1H3BQB6 276 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 PRDX1Q06830 199 aaKnown RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 OR6V1Q8N148 313 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 OR10K1Q8NGX5 313 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 FAM173AQ9BQD7 235 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 TXLNGYQ9BZA5 131 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 NIPAL2Q9H841 368 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 UFSP2Q9NUQ7 469 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 GALR3O60755 368 aaPredicted RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 PIPP12273 146 aaPredicted RBP12.68□□□□□ -0.38
COL4A1-201ENST00000375820 LGALS4P56470 323 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 NHSL2Q5HYW2 709 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 TERB2Q8NHR7 220 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 ARPC5LQ9BPX5 153 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
COL4A1-201ENST00000375820 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CRYM-AS1A6NIL9 109 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 TPOP07202 933 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 NDUFB7P17568 137 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 NFYAP23511 347 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 F2RP25116 425 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 HOXD12P35452 270 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF169Q14929 603 aaPredicted RBP12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CCSMST1Q4G0I0 132 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
COL4A1-201ENST00000375820 CHCHD4Q8N4Q1 142 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms