RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 DUX4L5P0CJ88 424 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 DUX4L6P0CJ89 424 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 DUX4L7P0CJ90 424 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 C8orf89P0DMQ9 161 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 MAPK3P27361 379 aaPredicted RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 MAGEB1P43366 347 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 TMEM151BQ8IW70 566 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 CCDC116Q8IYX3 515 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 EID2Q8N6I1 236 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 ZNF433Q8N7K0 673 aaPredicted RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 SYNPRQ8TBG9 265 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 LCN9Q8WX39 176 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 ZNF764Q96H86 408 aaPredicted RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 HS6ST2Q96MM7 605 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 DUX4Q9UBX2 424 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 DNAJB6O75190 326 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 SEMA4FO95754 770 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 CNR1P21554 472 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 SLC2A5P22732 501 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 CDK2P24941 298 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 NTSP30990 170 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 CAPZA2P47755 286 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 ANXA11P50995 505 aaKnown RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 C1orf61Q13536 156 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 CRMP1Q14194 572 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 WDR88Q6ZMY6 472 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 C8orf33Q9H7E9 229 aaPredicted RBP11.81□□□□□ -0.52
MSH5-204ENST00000375755 KLHL28Q9NXS3 571 aa11.81□□□□□ -0.52
MSH5-204ENST00000375755 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 SOX1O00570 391 aaPredicted RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 GP1BAP07359 652 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 UBBP0CG47 229 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 UBCP0CG48 685 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 BMP7P18075 431 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 SRMP19623 302 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 HSD17B2P37059 387 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 RPS27AP62979 156 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 UBA52P62987 128 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 OR4C11Q6IEV9 310 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 ABCA7Q8IZY2 2146 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 OR10G6Q8NH81 332 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 WNT2BQ93097 391 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 CD180Q99467 661 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRSS27Q9BQR3 290 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 GPR174Q9BXC1 333 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 FKRPQ9H9S5 495 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRDM9Q9NQV7 894 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 TMEM74BQ9NUR3 256 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 APOBEC3BQ9UH17 382 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 COLQQ9Y215 455 aaPredicted RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 SPTBP11277 2137 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 FAM86C2PA6NEL3 165 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 ACOD1A6NK06 481 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 MAN2B1O00754 1011 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 ERI3O43414 337 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 MGMTP16455 207 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 KCNJ3P48549 501 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 AKR1C2P52895 323 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PDX1P52945 283 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PPP1CAP62136 330 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRR5P85299 388 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 TNFRSF17Q02223 184 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 AKR1C1Q04828 323 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRRT3Q5FWE3 981 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PWWP2BQ6NUJ5 590 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 TMEM64Q6YI46 380 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 CNRIP1Q96F85 164 aaPredicted RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 C10orf90Q96M02 699 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 CMSS1Q9BQ75 279 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 PCBD2Q9H0N5 130 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 OR5V1Q9UGF6 321 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 ZNF223Q9UK11 482 aaPredicted RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 ACOT7O00154 380 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 SULT1B1O43704 296 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 CERS1P27544 350 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 PRKAR1BP31321 381 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 RFC3P40938 356 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 SSR2P43308 183 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 STARP49675 285 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 UBE2IP63279 158 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 OR13C2Q8NGS9 318 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 C2CD4CQ8TF44 421 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 TNFAIP8L1Q8WVP5 186 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 S100A16Q96FQ6 103 aaKnown RBP11.8□□□□□ -0.52
MSH5-204ENST00000375755 MS4A4EQ96PG1 132 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 ATG4BQ9Y4P1 393 aa11.8□□□□□ -0.52
MSH5-204ENST00000375755 A0A0A6YYD5 115 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 TRBV2A0A0J9YWF9 115 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 TMIGD3P0DMS9 266 aaPredicted RBP11.79□□□□□ -0.52
MSH5-204ENST00000375755 ADCYAP1P18509 176 aa11.79□□□□□ -0.52
MSH5-204ENST00000375755 CD96P40200 585 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms