RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZNF35P13682 527 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 HOXB2P14652 356 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 IGFALSP35858 605 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 SMAD2Q15796 467 aaKnown RBP12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OR8K3Q8NH51 312 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 FBXW5Q969U6 566 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 HAVCR1Q96D42 359 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 SRMSQ9H3Y6 488 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 KIR3DX1Q9H7L2 352 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 ZC4H2Q9NQZ6 224 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 C14orf105Q9NVL8 296 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 COLEC10Q9Y6Z7 277 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 A0A1W2PQU0 124 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 H0YC42 278 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 ACOT7O00154 380 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 RP2O75695 350 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 GAS6Q14393 721 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 YOD1Q5VVQ6 348 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 DND1Q8IYX4 353 aaKnown RBP12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OR52R1Q8NGF1 315 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OR52H1Q8NGJ2 320 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OR10G6Q8NH81 332 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 STACQ99469 402 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 TCF7L1Q9HCS4 588 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 OPN4Q9UHM6 478 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 SNRPGP15A8MWD9 76 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 A8MXK9 166 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GOSR2O14653 212 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 SULT1B1O43704 296 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 MAS1P04201 325 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 IL5P05113 134 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 CD1AP06126 327 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GABRA1P14867 456 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 PVRP15151 417 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 MAP3K8P41279 467 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 MAZP56270 477 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF273Q14593 569 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 KCNAB1Q14722 419 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 Q6ZS52 159 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 SLC36A1Q7Z2H8 476 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 SCARB1Q8WTV0 552 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 PNPLA2Q96AD5 504 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF578Q96N58 590 aaPredicted RBP12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TMPRSS13Q9BYE2 586 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 STARD5Q9NSY2 213 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 PFDN2Q9UHV9 154 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GPR160Q9UJ42 338 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TOR1AO14656 332 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GPR75O95800 540 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 IGF2P01344 180 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GUCA2AQ02747 115 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 ILF3Q12906 894 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 ATRAIDQ6UW56 229 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TMPRSS12Q86WS5 348 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 EID2Q8N6I1 236 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 OR14C36Q8NHC7 312 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 FLVCR1-AS1Q8TAF5 88 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 FAM3CQ92520 227 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 GABRG3Q99928 467 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 APOOQ9BUR5 198 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TRIM2Q9C040 744 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
CLCNKA-202ENST00000375692 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 A0A087WV62 115 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CBX7O95931 251 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RAB40ALP0C0E4 278 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 DLX5P56178 289 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 NNATQ16517 81 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 SLC35F3Q8IY50 421 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 MUC20Q8N307 709 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 RAB40AQ8WXH6 277 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 PHYHIPQ92561 330 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
CLCNKA-202ENST00000375692 CHST6Q9GZX3 395 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms