RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PFDN2Q9UHV9 154 aa16.46■□□□□ 0.23
PTPDC1-202ENST00000375360 CCL27Q9Y4X3 112 aa16.46■□□□□ 0.23
PTPDC1-202ENST00000375360 ANKRD61A6NGH8 418 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 ZSCAN5BA6NJL1 495 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 THBS2P35442 1172 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 FASLGP48023 281 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 SLC35A1P78382 337 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 TGFBR3Q03167 851 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 H1FNTQ75WM6 255 aaPredicted RBP16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 C10orf111Q8N326 155 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 C7orf34Q96L11 122 aa16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 PCYT1BQ9Y5K3 369 aaPredicted RBP16.46■□□□□ 0.22
PTPDC1-202ENST00000375360 ARGFXA6NJG6 315 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 SEC14L2O76054 403 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 TGFBR1P36897 503 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 DCDC5Q6ZRR9 648 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 TMEM99Q8N816 258 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 TSPAN10Q9H1Z9 355 aaPredicted RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 GPR55Q9Y2T6 319 aaPredicted RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 BRCA1P38398 1863 aaKnown RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 RBM34P42696 430 aaKnown RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 HTR5AP47898 357 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 CASP6P55212 293 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 SNRPGP62308 76 aaKnown RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 COX15Q7KZN9 410 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 C1orf210Q8IVY1 113 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 GOT1L1Q8NHS2 421 aaPredicted RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 DUSP21Q9H596 190 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 GPATCH2Q9NW75 528 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 MED29Q9NX70 200 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 TNFSF15O95150 251 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 VAMP2P63027 116 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 ACKR1Q16570 336 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 YOD1Q5VVQ6 348 aaPredicted RBP16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 TMEM205Q6UW68 189 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 GPR32P1Q8NGA4 272 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 GPR119Q8TDV5 335 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 PIGCQ92535 297 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 MOKQ9UQ07 419 aa16.45■□□□□ 0.22
PTPDC1-202ENST00000375360 EIF1P41567 113 aaKnown RBP16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 RNF4P78317 190 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 PRTGQ2VWP7 1150 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 FAM26EQ8N5C1 309 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 IL17RDQ8NFM7 739 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 ST6GALNAC5Q9BVH7 336 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 SLC5A7Q9GZV3 580 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 WDR76Q9H967 626 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 TMEM9BQ9NQ34 198 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 MGAT4CQ9UBM8 478 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 PATE3B3GLJ2 98 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 APEX1P27695 318 aaKnown RBP16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 APLNRP35414 380 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 KCTD20Q7Z5Y7 419 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 VN1R1Q9GZP7 353 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 GALNT9Q9HCQ5 603 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 NOX4Q9NPH5 578 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 GPRIN2O60269 458 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 LIPCP11150 499 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 IL32P24001 234 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 EVI2BP34910 448 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 TOMM40LQ969M1 308 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 OR10A2Q9H208 303 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 MEPEQ9NQ76 525 aaPredicted RBP16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 ING1Q9UK53 422 aaPredicted RBP16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 NOSIPQ9Y314 301 aaKnown RBP16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 HLA-DMAP28067 261 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 GNRHRP30968 328 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 LCN1P31025 176 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 LIPNQ5VXI9 398 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 CORO6Q6QEF8 472 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 TBC1D15Q8TC07 691 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 NINJ1Q92982 152 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 PIGQQ9BRB3 760 aa16.44■□□□□ 0.22
PTPDC1-202ENST00000375360 WISP3O95389 354 aaPredicted RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 PAHP00439 452 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 SERPINA5P05154 406 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 FCARP24071 287 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 PCBP4P57723 403 aaKnown RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 HBMQ6B0K9 141 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 NANOS1Q8WY41 292 aaKnown RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 TM9SF4Q92544 642 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF226Q9NYT6 803 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 SLC43A1O75387 559 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 GABARAPO95166 117 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 CT62P0C5K7 136 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 DNASE1P24855 282 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 MSX1P28360 303 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 KMT5CQ86Y97 462 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 PRR18Q8N4B5 295 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 GDF15Q99988 308 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 PLA2G12AQ9BZM1 189 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 PCED1AQ9H1Q7 454 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 CCDC59Q9P031 241 aaKnown RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 KANTRA0A1W2PQU2 76 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF35P13682 527 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 RRADP55042 308 aa16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 GP2P55259 537 aaKnown RBP16.43■□□□□ 0.22
PTPDC1-202ENST00000375360 FAHD1Q6P587 224 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms