RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CT45A7P0DMV0 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A8P0DMV1 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A9P0DMV2 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CLDN17P56750 224 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TGFBR3Q03167 851 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM176BQ3YBM2 270 aaPredicted RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A2Q5DJT8 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A1Q5HYN5 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CLVS2Q5SYC1 327 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF321PQ8N8H1 164 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PLPP5Q8NEB5 264 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A3Q8NHU0 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 SLC6A20Q9NP91 592 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ACOD1A6NK06 481 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 FZD7O75084 574 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PMP2P02689 132 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 DEFA4P12838 97 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 SSR4P51571 173 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 GRB2P62993 217 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF77Q15935 545 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 OR5M1Q8NGP8 315 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 C20orf24Q9BUV8 137 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 DCAF13Q9NV06 445 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 C1orf123Q9NWV4 160 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MYH15Q9Y2K3 1946 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MRPL33O75394 65 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PPP3CBP16298 524 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CD27P26842 260 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 FCER1GP30273 86 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ADPRHP54922 357 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TLE4Q04727 773 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 EMX1Q04741 257 aaPredicted RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CATR1Q13166 79 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PLAC9Q5JTB6 97 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 LRRC28Q86X40 367 aaPredicted RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 OR13C2Q8NGS9 318 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 NIPAL2Q9H841 368 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PRRT4C9JH25 899 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TOR1AO14656 332 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 EDIL3O43854 480 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 C21orf33P30042 268 aaPredicted RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MLF1P58340 268 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PRDX1Q06830 199 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 FOXC1Q12948 553 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 KHDC1LQ5JSQ8 128 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 RTL6Q6ICC9 239 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CPEB2Q7Z5Q1 589 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 SUMF1Q8NBK3 374 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 S100A7P31151 101 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 SYPL1Q16563 259 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 PGGHGQ32M88 737 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ARHGAP11BQ3KRB8 267 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 CREB3L2Q70SY1 520 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ADAMTS16Q8TE57 1224 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 C3orf30Q96M34 536 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
TRAF1-201ENST00000373887 OR8G3PP0DMU2 310 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 F2RP25116 425 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 GABRA4P48169 554 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 FAM111BQ6SJ93 734 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
TRAF1-201ENST00000373887 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 C12orf49Q9H741 205 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ERVMER34-1Q9H9K5 563 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 GAB2Q9UQC2 676 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF593O00488 134 aaPredicted RBP13.25□□□□□ -0.29
TRAF1-201ENST00000373887 XRCC3O43542 346 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 GSTP1P09211 210 aaKnown RBP13.25□□□□□ -0.29
TRAF1-201ENST00000373887 HNF1AP20823 631 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 TGM1P22735 817 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 URGCP-MRPS24S4R325 110 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ADRA1AP35348 466 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 HTR3AP46098 478 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 PDZD11Q5EBL8 140 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 GGHQ92820 318 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 FGF14Q92915 247 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 MUCL1Q96DR8 90 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 FAM122AQ96E09 287 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 UBL7Q96S82 380 aaPredicted RBP13.25□□□□□ -0.29
TRAF1-201ENST00000373887 SELENOIQ9C0D9 397 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 BABAM2Q9NXR7 383 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 METTL15A6NJ78 407 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 MCRIP1C9JLW8 97 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 PGFP49763 221 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 SLC6A19Q695T7 634 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 WBP2NLQ6ICG8 309 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 FAM185AQ8N0U4 392 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 OR52H1Q8NGJ2 320 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 OR11L1Q8NGX0 322 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF281Q9Y2X9 895 aa13.25□□□□□ -0.29
TRAF1-201ENST00000373887 NPFFR2Q9Y5X5 522 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms