RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 EPPINO95925 133 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RECKO95980 971 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 EVI2BP34910 448 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 LTBQ06643 244 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 BEX5Q5H9J7 111 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SLC18B1Q6NT16 456 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NOX3Q9HBY0 568 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NRIP3Q9NQ35 241 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 MED11Q9P086 117 aa16.18■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZNF749O43361 778 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CREBL2O60519 120 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CYB5AP00167 134 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ATF1P18846 271 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CCNOP22674 350 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 FRKP42685 505 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RFX2P48378 723 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CLRN1P58418 232 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CDK10Q15131 360 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 EEF1A1P5Q5VTE0 462 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 GARNL3Q5VVW2 1013 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NDUFAF7Q7L592 441 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZNF321PQ8N8H1 164 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ACBD4Q8NC06 268 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SLC25A44Q96H78 314 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CCDC120Q96HB5 630 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR5B2Q96R09 309 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ALKBH4Q9NXW9 302 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SLC2A5P22732 501 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SCRN3Q0VDG4 424 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 C1QL3Q5VWW1 255 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 GLT8D1Q68CQ7 371 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CRB3Q9BUF7 120 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 KLF15Q9UIH9 416 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR6C68A6NDL8 312 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NUPL2O15504 423 aaKnown RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SUSD5O60279 629 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RPL18Q07020 188 aaKnown RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RAB11BQ15907 218 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 VSX1Q9NZR4 365 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SPEF1Q9Y4P9 236 aa16.17■□□□□ 0.18
TRAF3IP1-201ENST00000373327 C17orf51A8MQB3 221 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 IFNA7P01567 189 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZNF440Q8IYI8 595 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 KTI12Q96EK9 354 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 LCORQ96JN0 433 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ABHD1Q96SE0 405 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 LPAR4Q99677 370 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RNF32Q9H0A6 362 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SERINC1Q9NRX5 453 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZNF217O75362 1048 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR7A10O76100 309 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ANXA7P20073 488 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 PSG6Q00889 435 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 FZD2Q14332 565 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NEK7Q8TDX7 302 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 PELI1Q96FA3 418 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SPACA5Q96QH8 159 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ATF4P18848 351 aaPredicted RBP16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 NPR2P20594 1047 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZNF136P52737 540 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 BTN2A1Q7KYR7 527 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TMEM234Q8WY98 164 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 HSD17B8Q92506 261 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 MOGAT1Q96PD6 335 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 EMC9Q9Y3B6 208 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 A0A0A6YYJ9 748 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 A0A1B0GVI7 797 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TMEM221A6NGB7 291 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 GOSR2O14653 212 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 LANCL1O43813 399 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 AKR1C4P17516 323 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RBMS1P29558 406 aaKnown RBP16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR3A3P47888 321 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR3A2P47893 321 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CMTM4Q8IZR5 234 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 UPRTQ96BW1 309 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ERVMER34-1Q9H9K5 563 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 KCNG2Q9UJ96 466 aa16.16■□□□□ 0.18
TRAF3IP1-201ENST00000373327 VSTM2BA6NLU5 285 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 PRSS3P35030 304 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 EEF1A1P68104 462 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CAMK2DQ13557 499 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 GPR50Q13585 617 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SLC22A10Q63ZE4 541 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 DPY19L2P2Q6ZN68 376 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 SLC35F3Q8IY50 421 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 OR5D18Q8NGL1 313 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 LMF2Q9BU23 707 aaKnown RBP16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 GSKIPQ9P0R6 139 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 KCNE5Q9UJ90 142 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 PLA2G10O15496 165 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZIC2O95409 532 aaPredicted RBP16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 ZGLP1P0C6A0 271 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 RAET1LQ5VY80 246 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
TRAF3IP1-201ENST00000373327 TPRA1Q86W33 373 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms