RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ALPPL2P10696 532 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 IL9P15248 144 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 MAS1LP35410 378 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 TAS2R50P59544 299 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 CDC42EP1Q00587 391 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 MRPL58Q14197 206 aaKnown RBP8.75□□□□□ -1.01
SF3A3-201ENST00000373019 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 C16orf78Q8WTQ4 265 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 SMIM8Q96KF7 97 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 UBQLN3Q9H347 655 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 POT1Q9NUX5 634 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 MTFP1Q9UDX5 166 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 LAMP5Q9UJQ1 280 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 FBXO4Q9UKT5 387 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 SLC27A6Q9Y2P4 619 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 IL3P08700 152 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 MRPL3P09001 348 aaKnown RBP8.75□□□□□ -1.01
SF3A3-201ENST00000373019 SRMP19623 302 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 NME2P22392 152 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 VAMP1P23763 118 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 CD80P33681 288 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 ADPRHP54922 357 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 HNRNPKP61978 463 aaKnown RBP eCLIP8.75□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF234Q14588 700 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 GRHL2Q6ISB3 625 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 AVL9Q8NBF6 648 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 OR4K14Q8NGD5 310 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 PTGES2Q9H7Z7 377 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 NRIP3Q9NQ35 241 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 DNAJB11Q9UBS4 358 aa8.75□□□□□ -1.01
SF3A3-201ENST00000373019 RPL36A-HNRNPH2H7BZ11 118 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 EREGO14944 169 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 KLF4O43474 513 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PRICKLE3O43900 615 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 CTNSO60931 367 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PMS2P2O95744 297 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 F10P00742 488 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ZGLP1P0C6A0 271 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PGAM2P15259 253 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PCSK1P29120 753 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 CRABP1P29762 137 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SLC26A5P58743 744 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 B4GALNT1Q00973 533 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 INSM1Q01101 510 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 MEF2DQ14814 521 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SPNS3Q6ZMD2 512 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 THOC6Q86W42 341 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 OR56B1Q8NGI3 324 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 AMDHD1Q96NU7 426 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 INSM2Q96T92 566 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 UNKLQ9H9P5 680 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3DA0A087WVF3 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3IA0A087WXS9 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3EA0A087X179 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3KA0A087X1G2 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3FA6NER0 549 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3LB9A6J9 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 CDC42EP2O14613 210 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ARL6IP5O75915 188 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TPT1P13693 172 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TAS2R43P59537 309 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SLC7A9P82251 487 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 EFEMP1Q12805 493 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 KIAA0141Q14154 515 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 USF2Q15853 346 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3CQ6IPX1 549 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF620Q6ZNG0 422 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 TBC1D3Q8IZP1 549 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PRSS35Q8N3Z0 413 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 PNLDC1Q8NA58 520 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 MVB12AQ96EY5 273 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 RBM18Q96H35 190 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ZNF607Q96SK3 696 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ACBD6Q9BR61 282 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 OPN3Q9H1Y3 402 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 EXO5Q9H790 373 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 FN3KRPQ9HA64 309 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ICKQ9UPZ9 632 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 OR52A4PA6NMU1 304 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 GLCEO94923 617 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 XPAP23025 273 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 GPR4P46093 362 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ENPP7Q6UWV6 458 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SKA2Q8WVK7 121 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SECTM1Q8WVN6 248 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 KLK6Q92876 244 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SULT4A1Q9BR01 284 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 ACTRT3Q9BYD9 372 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 SLC25A18Q9H1K4 315 aa8.74□□□□□ -1.01
SF3A3-201ENST00000373019 OGG1O15527 345 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
SF3A3-201ENST00000373019 CD160O95971 181 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 TGFB1P01137 390 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 C8GP07360 202 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 SOD3P08294 240 aa8.73□□□□□ -1.01
SF3A3-201ENST00000373019 C6P13671 934 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms