RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ANKRD20A5PA0PJZ0 165 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 GXYLT2A0PJZ3 443 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3BA6NDS4 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3FA6NER0 549 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3LB9A6J9 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 F8W036 122 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 DCTN6O00399 190 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FADS1O60427 444 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CLN5O75503 358 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ABLIM3O94929 683 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR2A4O95047 310 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PLGP00747 810 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CRYBA1P05813 215 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ACAA1P09110 424 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3HP0C7X1 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 GTF2F2P13984 249 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 AK4P27144 223 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 MPGP29372 298 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NTSP30990 170 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 MAPK8P45983 427 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CAPZA2P47755 286 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 STARP49675 285 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PGDP52209 483 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SIRPAP78324 504 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 STX4Q12846 297 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FAM53BQ14153 422 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NR0B2Q15466 257 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 MLF2Q15773 248 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 DECR1Q16698 335 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PABPC1L2AQ5JQF8 200 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 UBE2NLQ5JXB2 153 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 LY6G6FQ5SQ64 297 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3GQ6DHY5 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3CQ6IPX1 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 HAGHLQ6PII5 290 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TSSK4Q6SA08 328 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SLC36A1Q7Z2H8 476 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR2W3Q7Z3T1 314 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3Q8IZP1 549 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 LINC00471Q8N535 108 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 GATSQ8NAP1 163 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SEMA6DQ8NFY4 1073 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR52L1Q8NGH7 329 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR1J2Q8NGS2 313 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NUBPLQ8TB37 319 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ARRDC3Q96B67 414 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 IGSF21Q96ID5 467 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 MRGPRX3Q96LB0 322 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR2A7Q96R45 310 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 AIF1LQ9BQI0 150 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 POFUT1Q9H488 388 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TAS2R5Q9NYW4 299 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FLRT3Q9NZU0 649 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 IL36AQ9UHA7 158 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PURGQ9UJV8 347 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF223Q9UK11 482 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PCOLCE2Q9UKZ9 415 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 GTF2A1LQ9UNN4 478 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SIGLEC7Q9Y286 467 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PLEKHA6Q9Y2H5 1048 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 Q9Y3F1 56 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ASCC3Q8N3C0 2202 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 DENND4AQ7Z401 1863 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CNTRLQ7Z7A1 2325 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 A0A0G2JPF8 293 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 MED19A0JLT2 244 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF705EA8MWA4 302 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HNRNPCL3B7ZW38 293 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PRRT4C9JH25 899 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 H7C2Y5 167 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 GRM6O15303 877 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SIGLEC6O43699 453 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PQBP1O60828 265 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ICOSLGO75144 302 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 NDUFB6O95139 128 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 FARS2O95363 451 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 HNRNPCL4P0DMR1 293 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DAOP14920 347 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF28P17035 718 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SLC2A5P22732 501 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 AVPR2P30518 371 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 IFNGR2P38484 337 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ATP1B3P54709 279 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 EPHB3P54753 998 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 RAP2BP61225 183 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 POLR2LP62875 67 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 PITPNAQ00169 270 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 BAMBIQ13145 260 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DYRK1AQ13627 763 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CLINT1Q14677 625 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SLC9A5Q14940 896 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 UBXN2BQ14CS0 331 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SMAD2Q15796 467 aaKnown RBP4.94□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF528Q3MIS6 628 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SCGB2B2Q4G0G5 96 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 DPPA4Q7L190 304 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 SLC29A4Q7RTT9 530 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 CD163Q86VB7 1156 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 NPAS4Q8IUM7 802 aa4.94□□□□□ -1.62
ATG4A-204ENST00000372246 GALNT16Q8N428 558 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms