RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FUT7Q11130 342 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 DECR1Q16698 335 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 SLC25A30Q5SVS4 291 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 HLA-DQA1Q5Y7H0 255 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 RHBDD2Q6NTF9 364 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 RTL4Q6ZR62 310 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 SLITRK4Q8IW52 837 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 GPALPP1Q8IXQ4 340 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 CDK20Q8IZL9 346 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 FANK1Q8TC84 345 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ZNF721Q8TF20 911 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 SMAP2Q8WU79 429 aaPredicted RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 ZNF578Q96N58 590 aaPredicted RBP9.71□□□□□ -0.85
TPM3-212ENST00000368533 STACQ99469 402 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 CRB3Q9BUF7 120 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ENKD1Q9H0I2 346 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 HPF1Q9NWY4 346 aa9.71□□□□□ -0.85
TPM3-212ENST00000368533 ADAMTS20P59510 1910 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 CACNA1CQ13936 2221 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 ZNF318Q5VUA4 2279 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 TRAV27A0A087WT01 109 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 UNC119BA6NIH7 251 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 LINC00587B1AMM8 73 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 DVL2O14641 736 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 ICOSLGO75144 302 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
TPM3-212ENST00000368533 AGR2O95994 175 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 APOC3P02656 99 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 MAP3K8P41279 467 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 GAS1P54826 345 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 SLC3A1Q07837 685 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 PUDPQ08623 228 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 SERTAD2Q14140 314 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 CLLU1Q5K131 121 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 RNLSQ5VYX0 342 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 BICRALQ6AI39 1079 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 MZT2BQ6NZ67 158 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 ZNF620Q6ZNG0 422 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 MBOAT2Q6ZWT7 520 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 FAM181AQ8N9Y4 354 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 CYB561A3Q8NBI2 242 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 WDFY2Q96P53 400 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 MARVELD1Q9BSK0 173 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 OR52D1Q9H346 318 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 NUDT15Q9NV35 164 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 SLCO1C1Q9NYB5 712 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 FBXL2Q9UKC9 423 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 BAIAP2Q9UQB8 552 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 B3GALT1Q9Y5Z6 326 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 CDH10Q9Y6N8 788 aa9.71□□□□□ -0.86
TPM3-212ENST00000368533 FRYQ5TBA9 3013 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 KDM4EB2RXH2 506 aaPredicted RBP9.7□□□□□ -0.86
TPM3-212ENST00000368533 IFNA7P01567 189 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 HAAOP46952 286 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 PPP3R1P63098 170 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 IGLV3-21P80748 117 aaPredicted RBP9.7□□□□□ -0.86
TPM3-212ENST00000368533 DCDP81605 110 aaKnown RBP9.7□□□□□ -0.86
TPM3-212ENST00000368533 AADACL4Q5VUY2 407 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 DHRS13Q6UX07 377 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 IL20RBQ6UXL0 311 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 ZNF600Q6ZNG1 722 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 MARCH3Q86UD3 253 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 SIRT6Q8N6T7 355 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 NPAS1Q99742 590 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 SHARPINQ9H0F6 387 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 IGKV3D-11A0A0A0MRZ8 115 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 FAM74A7A6NL05 159 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 C4orf47A7E2U8 309 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 ITPKBP27987 946 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 RORAP35398 523 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 GRK6P43250 576 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 SRP9P49458 86 aaKnown RBP9.7□□□□□ -0.86
TPM3-212ENST00000368533 EFNB1P98172 346 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 FAM74A3Q4VXF1 159 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 PRAMEF8Q5VWM4 474 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 PRAMEF7Q5VXH5 474 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 MZT2AQ6P582 158 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 ACBD7Q8N6N7 88 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 NR4A3Q92570 626 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 PTP4A1Q93096 173 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 GSX2Q9BZM3 304 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 CHIAQ9BZP6 476 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 IL20Q9NYY1 176 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 PISDQ9UG56 409 aa9.7□□□□□ -0.86
TPM3-212ENST00000368533 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
TPM3-212ENST00000368533 A0A1B0GWA3 101 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 TRDV1A0A1B0GX56 115 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 CDX4O14627 284 aaPredicted RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 CDC40O60508 579 aaKnown RBP eCLIP9.69□□□□□ -0.86
TPM3-212ENST00000368533 OR5F1O95221 314 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 GYPBP06028 91 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 EMP2P54851 167 aa9.69□□□□□ -0.86
TPM3-212ENST00000368533 ELAVL1Q15717 326 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 PEAR1Q5VY43 1037 aaPredicted RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 PAPD4Q6PIY7 484 aaKnown RBP9.69□□□□□ -0.86
TPM3-212ENST00000368533 KIRREL2Q6UWL6 708 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms