RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 MESTQ5EB52 335 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 TMEM255AQ5JRV8 349 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 THOC7Q6I9Y2 204 aaKnown RBP16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 NANOGNBQ7Z5D8 188 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 GKN2Q86XP6 184 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 EXD3Q8N9H8 876 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 OR8K3Q8NH51 312 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 TSPAN32Q96QS1 320 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 SYT4Q9H2B2 425 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 CUTCQ9NTM9 273 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 STMN3Q9NZ72 180 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 ABCA7Q8IZY2 2146 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 IGHV1OR15-9A0A0B4J2B8 117 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 UPK3AO75631 287 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 CD1AP06126 327 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 DPP4P27487 766 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 CD38P28907 300 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 ST3GAL2Q16842 350 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 GSG1Q2KHT4 349 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 TCTE1Q5JU00 501 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 FAM220AQ7Z4H9 259 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 OR5AK2Q8NH90 309 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 THEM6Q8WUY1 208 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 GIMAP1Q8WWP7 306 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 ADAMTS14Q8WXS8 1223 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 MGAT4AQ9UM21 535 aa16.44■□□□□ 0.22
UBQLN4-201ENST00000368309 TMEM150CB9EJG8 249 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 H0YIG0 161 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 NME1P15531 152 aaKnown RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 RORAP35398 523 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 VWA2Q5GFL6 755 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 MARCH3Q86UD3 253 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 C9orf62Q8N4C0 152 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 LCORQ96JN0 433 aaPredicted RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 CITED4Q96RK1 184 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 MFRPQ9BY79 579 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ULBP3Q9BZM4 244 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 TCF7L1Q9HCS4 588 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 LAMP5Q9UJQ1 280 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ING4Q9UNL4 249 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 CABIN1Q9Y6J0 2220 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 AKR7A3O95154 331 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 HIST1H2ABP04908 130 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 TACSTD2P09758 323 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ZNF24P17028 368 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 EFNA3P52797 238 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 HIST3H2AQ7L7L0 130 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 OR7G1Q8NGA0 311 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 OR11H4Q8NGC9 324 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 OR10AC1Q8NH08 325 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 HIST1H2ACQ93077 130 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 SLC25A36Q96CQ1 311 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 UNC13CQ8NB66 2214 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 TLCD2A6NGC4 264 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 PDCD5O14737 125 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 PLGP00747 810 aaPredicted RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 UQCRC1P31930 480 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ADH7P40394 386 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ZNF117Q03924 483 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ALKBH1Q13686 389 aaKnown RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 STAC2Q6ZMT1 411 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 SYNPRQ8TBG9 265 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ZNF431Q8TF32 576 aaPredicted RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 SLC46A1Q96NT5 459 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 OR5V1Q9UGF6 321 aa16.43■□□□□ 0.22
UBQLN4-201ENST00000368309 ADRA2CP18825 462 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 NR0B1P51843 470 aaKnown RBP16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 SLC25A1P53007 311 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 PM20D2Q8IYS1 436 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 OR51A4Q8NGJ6 313 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 NUDT9Q9BW91 350 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 ZFP64Q9NPA5 681 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 UCKL1Q9NWZ5 548 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 ZNF593O00488 134 aaPredicted RBP16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 ITGA10O75578 1167 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 HPXP02790 462 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 MAS1P04201 325 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 FOXL2P58012 376 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 FAAP20Q6NZ36 180 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 LRRC69Q6ZNQ3 347 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 C1orf216Q8TAB5 229 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 LMAN1LQ9HAT1 526 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 GSTZ1O43708 216 aaPredicted RBP16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 SSNA1O43805 119 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 CENPAP49450 140 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 SLC22A10Q63ZE4 541 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 SYT13Q7L8C5 426 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 RPS4Y2Q8TD47 263 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 PHYHIPQ92561 330 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 ADIPOR1Q96A54 375 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 OR2M2Q96R28 347 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 IRF2BPLQ9H1B7 796 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 MOKQ9UQ07 419 aa16.42■□□□□ 0.22
UBQLN4-201ENST00000368309 LILRA5A6NI73 299 aa16.41■□□□□ 0.22
UBQLN4-201ENST00000368309 Q499Y3 187 aa16.41■□□□□ 0.22
UBQLN4-201ENST00000368309 SLC6A19Q695T7 634 aa16.41■□□□□ 0.22
UBQLN4-201ENST00000368309 BTN2A1Q7KYR7 527 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms