RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 EMC8O43402 210 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 MFSD11O43934 449 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 FAM189A1O60320 539 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SOX14O95416 240 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 EPXP11678 715 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 PTAFRP25105 342 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SFTPDP35247 375 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SOX2P48431 317 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ERVPABLB-1P60509 514 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CTBSQ01459 385 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 GAB1Q13480 694 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 H3F3CQ6NXT2 135 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 NAPRTQ6XQN6 538 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 STEAP2Q8NFT2 490 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 NT5DC2Q9H857 520 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ZBTB26Q9HCK0 441 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ACKR4Q9NPB9 350 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 PITPNC1Q9UKF7 332 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 NAV1Q8NEY1 1877 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 TOX3O15405 576 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 ALOX12BO75342 701 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 AKR1C4P17516 323 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 PBX2P40425 430 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 RNF144AP50876 292 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 MFAP4P55083 255 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 TCL1AP56279 114 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CLDN2P57739 230 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 FRG2Q64ET8 278 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 MKXQ8IYA7 352 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SENP5Q96HI0 755 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-206ENST00000367253 FRG2BQ96QU4 278 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 OR52B2Q96RD2 323 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 RANBP9Q96S59 729 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SYT3Q9BQG1 590 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 SLCO3A1Q9UIG8 710 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 NUBP2Q9Y5Y2 271 aa8.02□□□□□ -1.13
SYNE1-206ENST00000367253 NAP1L6A6NFF2 107 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 METTL15A6NJ78 407 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SLC31A2O15432 143 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 FUCA1P04066 466 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 MMP7P09237 267 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 DRD5P21918 477 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PTH2RP49190 550 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ATP1B3P54709 279 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 EMP3P54852 163 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PIGPP57054 158 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HMGN3Q15651 99 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ACTBL2Q562R1 376 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 RIPPLY2Q5TAB7 128 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF595Q8IYB9 648 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OR2AE1Q8NHA4 323 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 BLNKQ8WV28 456 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PHYHIPQ92561 330 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 AKTIPQ9H8T0 292 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 LANCL2Q9NS86 450 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 USP22Q9UPT9 525 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SNCGO76070 127 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ADH4P08319 380 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 DHRS4L1P0CG22 281 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TAS2R31P59538 309 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 FOXO1Q12778 655 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TNK1Q13470 666 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SMAD2Q15796 467 aaKnown RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 BAK1Q16611 211 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SLC5A12Q1EHB4 618 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CST9LP1Q5W188 147 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TSSK4Q6SA08 328 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 C6orf89Q6UWU4 347 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 NIPA2Q8N8Q9 360 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OR51G2Q8NGK0 314 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HSD17B8Q92506 261 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SPIN2AQ99865 258 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SPIN2BQ9BPZ2 258 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SLC38A1Q9H2H9 487 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 LINC00597Q9H2U6 94 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 LYRM2Q9NU23 88 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 SERTAD4Q9NUC0 356 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HCFC1R1Q9NWW0 138 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ING1Q9UK53 422 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CSNK1G3Q9Y6M4 447 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 MEIOCA2RUB1 952 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF814B7Z6K7 855 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 AMY2AP04746 511 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 C1GALT1C1LP0DN25 315 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF17P17021 662 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 CDKN2BP42772 138 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 PPT1P50897 306 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 TAS2R20P59543 309 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ARHGAP19Q14CB8 494 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OR5M10Q6IEU7 315 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 MED25Q71SY5 747 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF573Q86YE8 665 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 FADS6Q8N9I5 356 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 OR52B6Q8NGF0 335 aa8.01□□□□□ -1.13
SYNE1-206ENST00000367253 HAS2Q92819 552 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms