RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 MSRB3Q8IXL7 192 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
CTSD-202ENST00000367196 SLC41A3Q96GZ6 507 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 TMEM43Q9BTV4 400 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 SLCO1B3Q9NPD5 702 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 SLAMF8Q9P0V8 285 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 SEC14L4Q9UDX3 406 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 LEF1Q9UJU2 399 aaPredicted RBP12.88□□□□□ -0.35
CTSD-202ENST00000367196 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 MXRA5Q9NR99 2828 aa12.88□□□□□ -0.35
CTSD-202ENST00000367196 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 IGKV1D-42A0A075B6H8 117 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 VWC2LB2RUY7 222 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 hCG_2039718K7EN88 272 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 TRAF3IP2O43734 574 aaPredicted RBP12.87□□□□□ -0.35
CTSD-202ENST00000367196 LMX1BO60663 402 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 FMO6PO60774 539 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 ENTPD5O75356 428 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 LY6HO94772 140 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 MT-ATP6P00846 226 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 NPR2P20594 1047 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 CALCRP30988 508 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 POU3F1Q03052 451 aaPredicted RBP12.87□□□□□ -0.35
CTSD-202ENST00000367196 RBBP4Q09028 425 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 NPRL3Q12980 569 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 PAGE3Q5JUK9 113 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 SLC30A8Q8IWU4 369 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 TMEM123Q8N131 208 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 C10orf53Q8N6V4 93 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 C11orf65Q8NCR3 313 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 EBF4Q9BQW3 602 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
CTSD-202ENST00000367196 DYNLRB1Q9NP97 96 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
CTSD-202ENST00000367196 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
CTSD-202ENST00000367196 TRBV5-3A0A0A0MS03 114 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 M0R3G1 203 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 ANGPT2O15123 496 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 CBLP22681 906 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 AQP1P29972 269 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 PMS2P3Q13401 168 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 DAG1Q14118 895 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 CYP51A1Q16850 503 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 GSG1Q2KHT4 349 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 ZNF613Q6PF04 617 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 PXKQ7Z7A4 578 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 DHDDSQ86SQ9 333 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 MDP1Q86V88 176 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 C20orf196Q8IYI0 205 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 OR6N1Q8NGY5 312 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 ULBP2Q9BZM5 246 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
CTSD-202ENST00000367196 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.353e-10■□□□□ 10.2
CTSD-202ENST00000367196 LOC100289279A0A1B0GTE1 492 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 MS4A18H0YCH9 400 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 CHP2O43745 196 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 TPST1O60507 370 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 OR6A2O95222 327 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 RAB36O95755 333 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 BGLAPP02818 100 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 ZNF23P17027 643 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 SRD5A1P18405 259 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 AHCYP23526 432 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 LSP1P33241 339 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 THBS2P35442 1172 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 CDH12P55289 794 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 RPS23P62266 143 aaKnown RBP12.85□□□□□ -0.35
CTSD-202ENST00000367196 SNTB2Q13425 540 aaKnown RBP12.85□□□□□ -0.35
CTSD-202ENST00000367196 MS4A18Q3C1V0 323 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 UGT2A3Q6UWM9 527 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 ZNF813Q6ZN06 617 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 ZNF627Q7L945 461 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 COMTD1Q86VU5 262 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 C10orf111Q8N326 155 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 ANKS4BQ8N8V4 417 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 OR5J2Q8NH18 312 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
CTSD-202ENST00000367196 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 SLC52A3Q9NQ40 469 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 INTS9Q9NV88 658 aaKnown RBP12.85□□□□□ -0.35
CTSD-202ENST00000367196 NDUFAF1Q9Y375 327 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
CTSD-202ENST00000367196 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 PHF1O43189 567 aaPredicted RBP12.84□□□□□ -0.35
CTSD-202ENST00000367196 MFN2O95140 757 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 UBL3O95164 117 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 HPRP00739 348 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CELA3BP08861 270 aa12.84□□□□□ -0.35
CTSD-202ENST00000367196 CD79AP11912 226 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms