RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
PRKN-205ENST00000366897 PHPT1Q9NRX4 125 aaPredicted RBP12.41□□□□□ -0.42
PRKN-205ENST00000366897 UBE2QL1A1L167 161 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 BLOC1S5-TXNDC5H3BN57 136 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 ACOT7O00154 380 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 SDC3O75056 442 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 B3GALNT1O75752 331 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 NDUFB2O95178 105 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 FGF2P09038 288 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 DIO1P49895 249 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 DLX5P56178 289 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 LRRC37A5PQ49AS3 106 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 C4orf46Q504U0 113 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 OLFML2AQ68BL7 652 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 RNF44Q7L0R7 432 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 PAQR7Q86WK9 346 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 GATSQ8NAP1 163 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 NPEPL1Q8NDH3 523 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 OR14A16Q8NHC5 309 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 MNTQ99583 582 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 EVA1AQ9H8M9 152 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 F5H5P2 479 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 HRKO00198 91 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 B3GALT2O43825 422 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 BRINP1O60477 761 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 IGKV1D-16P01601 117 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 PPP3CBP16298 524 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 ATXN7L3Q14CW9 347 aaPredicted RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 DND1Q8IYX4 353 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 OR2AK2Q8NG84 335 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 OR51D1Q8NGF3 324 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 PNPLA2Q96AD5 504 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 MFFQ9GZY8 342 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
PRKN-205ENST00000366897 IKZF2Q9UKS7 526 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
PRKN-205ENST00000366897 EGFP01133 1207 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 TLX1P31314 330 aaPredicted RBP12.4□□□□□ -0.43
PRKN-205ENST00000366897 LTBQ06643 244 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 LIPNQ5VXI9 398 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 LEG1Q6P5S2 330 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 VITQ6UXI7 678 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 SLC36A1Q7Z2H8 476 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 TMED4Q7Z7H5 227 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 BIVMQ86UB2 503 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 FGF13Q92913 245 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.43
PRKN-205ENST00000366897 LDAHQ9H6V9 325 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 MYEF2Q9P2K5 600 aaKnown RBP12.4□□□□□ -0.43
PRKN-205ENST00000366897 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 MTCH2Q9Y6C9 303 aa12.4□□□□□ -0.43
PRKN-205ENST00000366897 DCTN6O00399 190 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 GMFGO60234 142 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 CDC123O75794 336 aaPredicted RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 GTF2F2P13984 249 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 AKR1C2P52895 323 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 AKR1C1Q04828 323 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 CDRT4Q8N9R6 151 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 POMGNT2Q8NAT1 580 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 OR52R1Q8NGF1 315 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 MIB2Q96AX9 1013 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 HDAC8Q9BY41 377 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 MED11Q9P086 117 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 SERTAD3Q9UJW9 196 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 ENTPD2Q9Y5L3 495 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 TRIOO75962 3097 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 TRAV18A0A075B6X5 111 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 ITGA10O75578 1167 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 RBBP9O75884 186 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 ANXA2P07355 339 aaKnown RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 MST1P26927 711 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 CDKN2AP42771 156 aaKnown RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 B3GNTL1Q67FW5 361 aaPredicted RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 LSM14AQ8ND56 463 aaKnown RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 SLC38A3Q99624 504 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 ALG12Q9BV10 488 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 WDR13Q9H1Z4 485 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 SRMSQ9H3Y6 488 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
PRKN-205ENST00000366897 FRRS1LQ9P0K9 344 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 DTX4Q9Y2E6 619 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 SLC22A7Q9Y694 548 aa12.39□□□□□ -0.43
PRKN-205ENST00000366897 OR6C65A6NJZ3 312 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms