RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 BHLHE40O14503 412 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 AKAP8O43823 692 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 IDH3BO43837 385 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CXCL13O43927 109 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MPZL2O60487 215 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 PTP4A3O75365 173 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SERPINI2O75830 405 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 VAMP5O95183 116 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 PPP1R3DO95685 299 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 IGHMP01871 453 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TP53P04637 393 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 HMGN1P05114 100 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CD14P08571 375 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 IGFBP1P08833 259 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TSPAN19P0C672 248 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 FCGR2AP12318 317 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 APEHP13798 732 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CPN1P15169 458 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ENPP1P22413 925 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MYF6P23409 242 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 EPHA2P29317 976 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SDHAP31040 664 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 POLR2IP36954 125 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SUCLG1P53597 346 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CLDN15P56746 228 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 FXYD6P3P58550 94 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CTXN1P60606 82 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ADARB1P78563 741 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MYBPC1Q00872 1141 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 IL5RAQ01344 420 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 POU3F1Q03052 451 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TOP3AQ13472 1001 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 C1DQ13901 141 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 GINS1Q14691 196 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SF3B4Q15427 424 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ZNF691Q5VV52 312 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 FAM205BPQ63HN1 556 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ZNF324BQ6AW86 544 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 GPR139Q6DWJ6 353 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TMEM225Q6GV28 225 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ABLIM2Q6H8Q1 611 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 THSD4Q6ZMP0 1018 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 C3P1Q6ZMU1 363 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 Q6ZPB1 254 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 FCRLAQ7L513 359 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 PXKQ7Z7A4 578 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MRGPRGQ86SM5 289 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 GPAT4Q86UL3 456 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 IGFN1Q86VF2 1251 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 JAZF1Q86VZ6 243 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CHERPQ8IWX8 916 aaKnown RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 UEVLDQ8IX04 471 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 LNX2Q8N448 690 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TMEM99Q8N816 258 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 OR8D4Q8NGM9 314 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MOSPD2Q8NHP6 518 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 NRGNQ92686 78 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 CCDC120Q96HB5 630 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 PLEKHA8Q96JA3 519 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ERMAPQ96PL5 475 aaPredicted RBP6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TNFRSF13CQ96RJ3 184 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TIMP4Q99727 224 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 KATNB1Q9BVA0 655 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SRXN1Q9BYN0 137 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 INIPQ9NRY2 104 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 SEC14L4Q9UDX3 406 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 LRCH1Q9Y2L9 728 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ZNF175Q9Y473 711 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 NOX1Q9Y5S8 564 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 HSPE1-MOB4S4R3N1 261 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 MTORP42345 2549 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 TACC2O95359 2948 aa6.05□□□□□ -1.44
RNU1-55P-201ENST00000365510 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 IGHV3-15A0A0B4J1V0 119 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 A0A1B0GTH9 108 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 SLC22A20A6NK97 555 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 FIGNL2A6NMB9 653 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 CLCA1A8K7I4 914 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 NPIPA2E9PIF3 369 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 E9PQ18 207 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 NPIPA3F8WFD2 350 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 XKRYO14609 159 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 IMPA2O14732 288 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 ARPC3O15145 178 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 SMAD9O15198 467 aaKnown RBP6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 DENRO43583 198 aaKnown RBP6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 CLIC3O95833 236 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 BCL10O95999 233 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 PLGP00747 810 aaPredicted RBP6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 F13BP05160 661 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 STSP08842 583 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 GNAO1P09471 354 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 EDN3P14138 238 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 ABOP16442 354 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 ZNF43P17038 809 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 PAICSP22234 425 aaKnown RBP6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 GRK5P34947 590 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 PTGS2P35354 604 aa6.04□□□□□ -1.44
RNU1-55P-201ENST00000365510 GIPRP48546 466 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms