RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PTCHD4Q6ZW05 846 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 FAM122BQ7Z309 247 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 PXKQ7Z7A4 578 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 UEVLDQ8IX04 471 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 PM20D2Q8IYS1 436 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 ENTHD1Q8IYW4 607 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 GHDCQ8N2G8 530 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 KDM8Q8N371 416 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 TRUB1Q8WWH5 349 aaKnown RBP18.43■□□□□ 0.54
SHISA4-201ENST00000362011 ZNF845Q96IR2 970 aaPredicted RBP18.43■□□□□ 0.54
SHISA4-201ENST00000362011 UCN2Q96RP3 112 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 PRDM14Q9GZV8 571 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 TXNIPQ9H3M7 391 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 ZNF226Q9NYT6 803 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 PLEKHB1Q9UF11 243 aaPredicted RBP18.43■□□□□ 0.54
SHISA4-201ENST00000362011 KLHL21Q9UJP4 597 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 ADAM18Q9Y3Q7 739 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 NOX1Q9Y5S8 564 aa18.43■□□□□ 0.54
SHISA4-201ENST00000362011 SPTBN1Q01082 2364 aaKnown RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 OR14I1A6ND48 311 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 M0R129 80 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 SERPINI2O75830 405 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 VAMP5O95183 116 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 PLGP00747 810 aaPredicted RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 IFNGP01579 166 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 SDHAP31040 664 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 ISL1P61371 349 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 HSF1Q00613 529 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 POU3F1Q03052 451 aaPredicted RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 CD47Q08722 323 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 TOP3AQ13472 1001 aaPredicted RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 MAD2L1BPQ15013 274 aaPredicted RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 PDK3Q15120 406 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 EMC4Q5J8M3 183 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 SLC35F1Q5T1Q4 408 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 CCDC103Q8IW40 242 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 TCEANCQ8N8B7 351 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 OR8J1Q8NGP2 316 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 FAR1Q8WVX9 515 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 Q96M85 177 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 DOCK7Q96N67 2140 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 TSPAN32Q96QS1 320 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 CMC2Q9NRP2 79 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 RASSF1Q9NS23 344 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 B3GAT1Q9P2W7 334 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 GRHPRQ9UBQ7 328 aa18.42■□□□□ 0.54
SHISA4-201ENST00000362011 ZNF346Q9UL40 294 aaKnown RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 MCTS1Q9ULC4 181 aaKnown RBP18.42■□□□□ 0.54
SHISA4-201ENST00000362011 ZGRF1Q86YA3 2104 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 LOC102725191A0A1B0GVB3 256 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 NPIPB13A6NJU9 1138 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 RIIAD1A6NNX1 92 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 NPIPB4C9JG80 1138 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 NPIPA2E9PIF3 369 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 NPIPA3F8WFD2 350 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 RAMP1O60894 148 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 TXNDC12O95881 172 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 HLA-DOBP13765 273 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 GNLYP22749 145 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 DAP3P51398 398 aaKnown RBP18.41■□□□□ 0.54
SHISA4-201ENST00000362011 RPL27P61353 136 aaKnown RBP18.41■□□□□ 0.54
SHISA4-201ENST00000362011 C1DQ13901 141 aaKnown RBP18.41■□□□□ 0.54
SHISA4-201ENST00000362011 HIST2H2BCQ6DN03 193 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 ABLIM2Q6H8Q1 611 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 GPAT4Q86UL3 456 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 ROBO4Q8WZ75 1007 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 UBE2FQ969M7 185 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 RASD2Q96D21 266 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 KLHL13Q9P2N7 655 aa18.41■□□□□ 0.54
SHISA4-201ENST00000362011 NOTCH2Q04721 2471 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 TEX13CA0A0J9YWL9 993 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 PRKYO43930 277 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 SLC2A10O95528 541 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 ZNF3P17036 446 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 ZNF43P17038 809 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 SNRPGP62308 76 aaKnown RBP18.4■□□□□ 0.54
SHISA4-201ENST00000362011 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHISA4-201ENST00000362011 KRR1Q13601 381 aaKnown RBP18.4■□□□□ 0.54
SHISA4-201ENST00000362011 POU4F3Q15319 338 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 ACKR1Q16570 336 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 SLC35D2Q76EJ3 337 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 FCRLAQ7L513 359 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 OR52E2Q8NGJ4 325 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 RHOXF1Q8NHV9 184 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 TMEM163Q8TC26 289 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 CPT1CQ8TCG5 803 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 FBLIM1Q8WUP2 373 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 SNRNP40Q96DI7 357 aaKnown RBP18.4■□□□□ 0.54
SHISA4-201ENST00000362011 IL4I1Q96RQ9 567 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 TUBA1CQ9BQE3 449 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 SF3B5Q9BWJ5 86 aaKnown RBP18.4■□□□□ 0.54
SHISA4-201ENST00000362011 PRRG4Q9BZD6 226 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 FN3KQ9H479 309 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 PNPLA3Q9NST1 481 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 UBAP1Q9NZ09 502 aa18.4■□□□□ 0.54
SHISA4-201ENST00000362011 PHF3Q92576 2039 aaKnown RBP18.39■□□□□ 0.54
SHISA4-201ENST00000362011 TLX2O43763 284 aaPredicted RBP18.39■□□□□ 0.53
SHISA4-201ENST00000362011 CYTIPO60759 359 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 BCL10O95999 233 aa18.39■□□□□ 0.53
SHISA4-201ENST00000362011 IFNGR1P15260 489 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms