RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TAS2R20P59543 309 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 RAB5BP61020 215 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM184AQ6ZMB5 413 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 PXT1Q8NFP0 134 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TIMM29Q9BSF4 260 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 DAPP1Q9UN19 280 aa12.79□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 DVL2O14641 736 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 RAB30Q15771 203 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SLC22A6Q4U2R8 563 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 DUSP18Q8NEJ0 188 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 DIO2Q92813 273 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SMIM19Q96E16 107 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 WDR77Q9BQA1 342 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ARID2Q68CP9 1835 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 PGCP20142 388 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SLC6A1P30531 599 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 NXF2Q9GZY0 626 aaKnown RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 ZBP1Q9H171 429 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 FBXO34Q9NWN3 711 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 HHLA2Q9UM44 414 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 POM121BA6NF01 834 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 IFNGR1P15260 489 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 TDGQ13569 410 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 CDKN3Q16667 212 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 AADACL4Q5VUY2 407 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 Q6ZSR6 202 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 PM20D2Q8IYS1 436 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 TEX19Q8NA77 164 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 FAM3DQ96BQ1 224 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 FOXRED1Q96CU9 486 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-201ENST00000361866 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
COL6A1-201ENST00000361866 LEUTXA8MZ59 168 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 SLC33A1O00400 549 aaPredicted RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 MTRF1O75570 445 aaKnown RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 TPPPO94811 219 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 TNK1Q13470 666 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 MYADMQ96S97 322 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 MRI1Q9BV20 369 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 ERVMER34-1Q9H9K5 563 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 MEPEQ9NQ76 525 aaPredicted RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 KCND3Q9UK17 655 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 TCRBV21S2A2A0A5A6 115 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 GMDSO60547 372 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 HPXP02790 462 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 TACR3P29371 465 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 NUDT1P36639 197 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 CSNK2A1P68400 391 aaPredicted RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 GLO1Q04760 184 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 GPNMBQ14956 572 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 ADAMTSL4Q6UY14 1074 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 ZFP82Q8N141 532 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 CSNK2A3Q8NEV1 391 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 SDHCQ99643 169 aaPredicted RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 NUDT22Q9BRQ3 303 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 SELENOIQ9C0D9 397 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 SERINC1Q9NRX5 453 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.36
COL6A1-201ENST00000361866 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.36
COL6A1-201ENST00000361866 MEGF11A6BM72 1044 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 CRTAPO75718 401 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-201ENST00000361866 ACHEP22303 614 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 OR1D4P47884 311 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 GUCA2AQ02747 115 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 FRMD1Q8N878 549 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 LINC01555Q8NAE3 123 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 OR13C9Q8NGT0 318 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 PDE7BQ9NP56 450 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 PYCARD-AS1I3L0S3 204 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 TXNL1O43396 289 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 CD3DP04234 171 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 CD14P08571 375 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 GAAP10253 952 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 PNMTP11086 282 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 SPI1P17947 270 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 ADH6P28332 368 aa12.77□□□□□ -0.37
COL6A1-201ENST00000361866 S100A2P29034 98 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms