RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ALG12Q9BV10 488 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 WDR76Q9H967 626 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 FGF22Q9HCT0 170 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 MRPS28Q9Y2Q9 187 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 C2CD4DB7Z1M9 353 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 NME4O00746 187 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SGCEO43556 437 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM11P17152 192 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 MPLP40238 635 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 AGFG1P52594 562 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 HNF4GQ14541 408 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ALKAL1Q6UXT8 129 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 HSD17B8Q92506 261 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SLC22A12Q96S37 553 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 RASD1Q9Y272 281 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 DSCR3O14972 297 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 UBBP0CG47 229 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ELAVL4P26378 380 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 BMI1P35226 326 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 UBE2G2P60604 165 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 FGFBP1Q14512 234 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 NHSL2Q5HYW2 709 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 LRRC56Q8IYG6 542 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF679Q8IYX0 411 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 OR13C2Q8NGS9 318 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 NT5C3BQ969T7 300 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 RAB3CQ96E17 227 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 RBMXL1Q96E39 390 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 A0A1W2PQL4 384 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 MITFO75030 526 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SORBS2O94875 1100 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 IVDP26440 423 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 PTPN6P29350 595 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 GPR85P60893 370 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CLN3Q13286 438 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 TRA2AQ13595 282 aaKnown RBP eCLIP10.12□□□□□ -0.793e-12■■■■□ 21.3
CLIP1-203ENST00000361654 IHHQ14623 411 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 DTWD1Q8N5C7 304 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 TMIGD2Q96BF3 282 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 RNF170Q96K19 258 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ABHD6Q9BV23 337 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CLMPQ9H6B4 373 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 NT5DC2Q9H857 520 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 PLCXD1Q9NUJ7 323 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 PGAP2Q9UHJ9 254 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 TIMM10BQ9Y5J6 103 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 YIF1AO95070 293 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 DRD5P21918 477 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 GPR3P46089 330 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF252P-AS1Q0IIN9 211 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SLC48A1Q6P1K1 146 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ABHD17CQ6PCB6 329 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 FAM198BQ6UWH4 519 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 DPY19L2P2Q6ZN68 376 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 GLB1L2Q8IW92 636 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 FAM185AQ8N0U4 392 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OR10X1Q8NGY0 326 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ZBTB8AQ96BR9 441 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 C3orf49Q96BT1 292 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 PFDN5Q99471 154 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 NUBP2Q9Y5Y2 271 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 H0YIG0 161 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 TSPAN12O95859 305 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 MT-CO3P00414 261 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 NPBWR1P48145 328 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 NOVP48745 357 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 LTBQ06643 244 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SELENBP1Q13228 472 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF718Q3SXZ3 478 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ESPNLQ6ZVH7 1005 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CBLL1Q75N03 491 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OR6V1Q8N148 313 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ACBD4Q8NC06 268 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CNOT2Q9NZN8 540 aaKnown RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 TBX21Q9UL17 535 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 PIGLQ9Y2B2 252 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SLC22A23A1A5C7 686 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SYT5O00445 386 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 HSPB6O14558 160 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 LGI1O95970 557 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OR2T7P0C7T2 308 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ATXN1LP0C7T5 689 aaKnown RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SSTR4P31391 388 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SNRPD2P62316 118 aaKnown RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 PYCR3Q53H96 274 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 PAGE3Q5JUK9 113 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ADGRG5Q8IZF4 528 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OR4M1Q8NGD0 313 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OR13J1Q8NGT2 312 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CCDC74BQ96LY2 380 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 STACQ99469 402 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms