RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 GDE1Q9NZC3 331 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 TRAV8-7A0A075B6U6 113 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PRR19A6NJB7 356 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PYCARD-AS1I3L0S3 204 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PDCD5O14737 125 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 OIP5O43482 229 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 CREBL2O60519 120 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 CXCL2P19875 107 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 DPP4P27487 766 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 DYRK1AQ13627 763 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 METTL11BQ5VVY1 283 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 HACD4Q5VWC8 232 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 ZNF550Q7Z398 422 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 C7orf61Q8IZ16 206 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 ZNF563Q8TA94 476 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 BAHD1Q8TBE0 780 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SLC2A12Q8TD20 617 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 TSEN15Q8WW01 171 aaKnown RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SLC25A36Q96CQ1 311 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 WDR76Q9H967 626 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 LAMP5Q9UJQ1 280 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 LOC100509620A0A075B734 347 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 RPS10-NUDT3A0A1W2PQS6 291 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GABARAPH6UMI1 98 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 KCNJ13O60928 360 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PTH2RP49190 550 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 AP3S2P59780 193 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 BTN1A1Q13410 526 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GRM7Q14831 915 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PWWP2BQ6NUJ5 590 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GLRX5Q86SX6 157 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SYS1Q8N2H4 156 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 TMEM106AQ96A25 262 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 CXorf58Q96LI9 332 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 DGAT2Q96PD7 388 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GSX2Q9BZM3 304 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 ARL6Q9H0F7 186 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SYNDIG1Q9H7V2 258 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 C12orf4Q9NQ89 552 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 SERTAD3Q9UJW9 196 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 CABIN1Q9Y6J0 2220 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 KIF26BQ2KJY2 2108 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 MED12Q93074 2177 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 MUC22E2RYF6 1773 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 FREM3P0C091 2139 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 KDM4BO94953 1096 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 AK1P00568 194 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 LIPCP11150 499 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 UBL4AP11441 157 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 ADRA2CP18825 462 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 PTGS2P35354 604 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GPR143P51810 404 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 TAS2R20P59543 309 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 TEX19Q8NA77 164 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 OR13H1Q8NG92 308 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 C16orf52Q8NHV5 167 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 MMABQ96EY8 250 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 GAL3ST4Q96RP7 486 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 MS4A7Q9GZW8 240 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 FRRS1LQ9P0K9 344 aa11.07□□□□□ -0.64
CLIP3-201ENST00000360535 AKAP7Q9P0M2 348 aaPredicted RBP11.07□□□□□ -0.64
CLIP3-201ENST00000360535 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 UNC13CQ8NB66 2214 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 TRAV18A0A075B6X5 111 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 B8ZZF3 427 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 G3V3Q6 166 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SIGLEC5O15389 551 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SLC35E2P0CK97 266 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 CTSEP14091 401 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 NUDT1P36639 197 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 EFNB2P52799 333 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 LTBQ06643 244 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SIGLEC14Q08ET2 396 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 C2orf68Q2NKX9 166 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 ALG10Q5BKT4 473 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 TMEM65Q6PI78 240 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 DPY19L2P2Q6ZN68 376 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 FAM174AQ8TBP5 190 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 ATOH1Q92858 354 aaPredicted RBP11.06□□□□□ -0.64
CLIP3-201ENST00000360535 NRSN2Q9GZP1 204 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SYT4Q9H2B2 425 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 PNO1Q9NRX1 252 aaKnown RBP11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SLC6A5Q9Y345 797 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 ZNF337Q9Y3M9 751 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 A0A1W2PQF6 199 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SERINC4A6NH21 518 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 GOSR2O14653 212 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 GTF2F2P13984 249 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 CCKBRP32239 447 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 C4orf46Q504U0 113 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 FAM69AQ5T7M9 428 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 SLC35F3Q8IY50 421 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 DEFB119Q8N690 84 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 TTC9Q92623 222 aa11.06□□□□□ -0.64
CLIP3-201ENST00000360535 C3orf49Q96BT1 292 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms