RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 WDR5BQ86VZ2 330 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 OR52I2Q8NH67 350 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 PIGCQ92535 297 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 TNFRSF13CQ96RJ3 184 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 GAREM1Q9H706 876 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 H7C1C5 153 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 CYB5BO43169 146 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 B4GALT3O60512 393 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 LGI1O95970 557 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 APLNRP35414 380 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 RAD52P43351 418 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 MRPL19P49406 292 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 LCN6P62502 163 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 H3F3AP84243 136 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 RAB35Q15286 201 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 Q6ZRG5 221 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 GPR34Q9UPC5 381 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 MYOM1P52179 1685 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 KIF1AQ12756 1690 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 TAAR5O14804 337 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 TPOP07202 933 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 NQO2P16083 231 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 FOXK2Q01167 660 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 GPM6BQ13491 265 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 SYT9Q86SS6 491 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 OR51A4Q8NGJ6 313 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 FAM103A1Q9BTL3 118 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 SUCNR1Q9BXA5 334 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 OR14J1Q9UGF5 321 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 V9GYS6 101 aa12.44□□□□□ -0.42
CCDC144A-203ENST00000360495 SULT2B1O00204 365 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 SYT5O00445 386 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 NXPH3O95157 252 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 SUOXP51687 545 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 HAGHQ16775 308 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ZBTB37Q5TC79 503 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 PDLIM5Q96HC4 596 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 LPAR4Q99677 370 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 NKX3-1Q99801 234 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 PAAF1Q9BRP4 392 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF586Q9NXT0 402 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 GPR55Q9Y2T6 319 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 DUX1O43812 170 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 CBX7O95931 251 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 AOAHP28039 575 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 RFX2P48378 723 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 SMAD2Q15796 467 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 GLYATL3Q5SZD4 288 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 TMEM184AQ6ZMB5 413 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF534Q76KX8 674 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 GCNT2Q8N0V5 402 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 DMBX1Q8NFW5 382 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ZCCHC4Q9H5U6 513 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 AK3Q9UIJ7 227 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 MTCP1P56278 107 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 POU3F1Q03052 451 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 Q6ZSR9 355 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 SLC22A24Q8N4F4 322 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF610Q8N9Z0 462 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 NMNAT3Q96T66 252 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 ARNT2Q9HBZ2 717 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 MED9Q9NWA0 146 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 AFDNP55196 1824 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 MYH7P12883 1935 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 SGK494L7N484 410 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 JTBO76095 146 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 F10P00742 488 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 CSF3P09919 207 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 PIPP12273 146 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 PTGER4P35408 488 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 LTB4RQ15722 352 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 MZB1Q8WU39 189 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 GPR174Q9BXC1 333 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 WDR76Q9H967 626 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 CHRNA9Q9UGM1 479 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 OR52A1Q9UKL2 312 aa12.43□□□□□ -0.42
CCDC144A-203ENST00000360495 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 NTF3P20783 257 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 HIST1H1TP22492 207 aaPredicted RBP12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 SUMO1P63165 101 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 IGSF11Q5DX21 431 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 KIAA0895LQ68EN5 471 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 CNKSR3Q6P9H4 555 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 TEX261Q6UWH6 196 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 LGI3Q8N145 548 aa12.42□□□□□ -0.42
CCDC144A-203ENST00000360495 INTS12Q96CB8 462 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms