RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 AIREO43918 545 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CPNE3O75131 537 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 PTTG1O95997 202 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 BCL10O95999 233 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 DHFRP00374 187 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 LALBAP00709 142 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 F10P00742 488 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 UMODP07911 640 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 HIST1H1CP16403 213 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 BMP7P18075 431 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 GRPRP30550 384 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 GALNSP34059 522 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 RPL4P36578 427 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 AQP2P41181 271 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 NR4A2P43354 598 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 MTNR1AP48039 350 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 GAS1P54826 345 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 EGR4Q05215 589 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 LTBQ06643 244 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CRMP1Q14194 572 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 GALEQ14376 348 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 IRF3Q14653 427 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 TBCEQ15813 527 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 SSX1Q16384 188 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 BTBD16Q32M84 506 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CRTC2Q53ET0 693 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 TOR2AQ5JU69 321 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ELP2Q6IA86 826 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 PYHIN1Q6K0P9 492 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CXXC5Q7LFL8 322 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF550Q7Z398 422 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CPEB2Q7Z5Q1 589 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 BTLAQ7Z6A9 289 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 CDK20Q8IZL9 346 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 KDM8Q8N371 416 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 KLHL36Q8N4N3 616 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 RFLNBQ8N5W9 214 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 TMEM99Q8N816 258 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF441Q8N8Z8 693 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF527Q8NB42 609 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 PLPP5Q8NEB5 264 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 OR10G3Q8NGC4 313 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 OR52L1Q8NGH7 329 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 RAB2BQ8WUD1 216 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 SLC25A36Q96CQ1 311 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 TRMT61AQ96FX7 289 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 Q96MT0 163 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 FOXN4Q96NZ1 517 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 TSSK2Q96PF2 358 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ERMAPQ96PL5 475 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 MGLLQ99685 303 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ANKRD19PQ9H560 264 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ISG20L2Q9H9L3 353 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 EXOSC4Q9NPD3 245 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 UFSP2Q9NUQ7 469 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 FAM86C1Q9NVL1 165 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 MED11Q9P086 117 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 VDAC3Q9Y277 283 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 RPL36Q9Y3U8 105 aaKnown RBP4.62□□□□□ -1.67
ATXN3-202ENST00000359366 IER3IP1Q9Y5U9 82 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 NPFFR2Q9Y5X5 522 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 ATMQ13315 3056 aa4.62□□□□□ -1.67
ATXN3-202ENST00000359366 A0A087WUJ7 227 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 VSTM2BA6NLU5 285 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 C11orf98E9PRG8 122 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 DVL2O14641 736 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 TSPAN4O14817 238 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 PRODHO43272 600 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 MPZL2O60487 215 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FMO6PO60774 539 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 RBBP9O75884 186 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 GPANK1O95872 356 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 PLGP00747 810 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FBXO45P0C2W1 286 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FGF5P12034 268 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 CD59P13987 128 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 IL11P20809 199 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 HTR2BP41595 481 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 RGS6P49758 472 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 RAB13P51153 203 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 DUSP3P51452 185 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 MADCAM1Q13477 382 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 OCLNQ16625 522 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 COL28A1Q2UY09 1125 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 TMEM201Q5SNT2 666 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 PRAMEF20Q5VT98 475 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FAM198BQ6UWH4 519 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 DHRS13Q6UX07 377 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 LINC00114Q6XXX2 140 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 TMPRSS11FQ6ZWK6 438 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 TIPARPQ7Z3E1 657 aaKnown RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 SLC46A3Q7Z3Q1 461 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 PLCZ1Q86YW0 608 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FAM98AQ8NCA5 519 aaKnown RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 SLC37A3Q8NCC5 494 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 FAM71CQ8NEG0 241 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 NLGN4YQ8NFZ3 816 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 OR52E2Q8NGJ4 325 aa4.61□□□□□ -1.67
ATXN3-202ENST00000359366 BRIX1Q8TDN6 353 aaKnown RBP4.61□□□□□ -1.67
ATXN3-202ENST00000359366 TM9SF4Q92544 642 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms