RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ANKRD61A6NGH8 418 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 GJE1A6NN92 205 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 H0Y8X5 98 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 M0QYG6 137 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 ZFAND5O76080 213 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 UTS2O95399 124 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 IFNA1P01562 189 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 C1QBP02746 253 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 TNFRSF4P43489 277 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CX3CR1P49238 355 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 DYRK1AQ13627 763 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 RCBTB1Q8NDN9 531 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 BBS1Q8NFJ9 593 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 OR10K1Q8NGX5 313 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 SLC37A2Q8TED4 501 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 FAM3DQ96BQ1 224 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 LCORQ96JN0 433 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 SULT4A1Q9BR01 284 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 EMC7Q9NPA0 242 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 WSB2Q9NYS7 404 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 MUTYHQ9UIF7 546 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 ADAM18Q9Y3Q7 739 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 GLI3P10071 1580 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 BRINP1O60477 761 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 BSGP35613 385 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 MRPS21P82921 87 aaKnown RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 CAMK2DQ13557 499 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CD276Q5ZPR3 534 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 DHRS4L2Q6PKH6 230 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 KDM8Q8N371 416 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 OR4K15Q8NH41 348 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 OR5B12Q96R08 314 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 ULBP2Q9BZM5 246 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 CMC2Q9NRP2 79 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 ACOXLQ9NUZ1 547 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 C19orf53Q9UNZ5 99 aaPredicted RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 PTRH2Q9Y3E5 179 aaKnown RBP12.65□□□□□ -0.38
VCP-201ENST00000358901 CDK5RAP2Q96SN8 1893 aa12.65□□□□□ -0.38
VCP-201ENST00000358901 BLACEA4D250 179 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 FOSL2P15408 326 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 CD6P30203 668 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 SOX18P35713 384 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 BTG1P62324 171 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 DPTQ07507 201 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 FGL2Q14314 439 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 BAK1Q16611 211 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 Q6ZTK2 550 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.39
VCP-201ENST00000358901 LILRB2Q8N423 598 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 GIMAP5Q96F15 307 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 TMEM59Q9BXS4 323 aa12.65□□□□□ -0.39
VCP-201ENST00000358901 SLIRPQ9GZT3 109 aaKnown RBP12.65□□□□□ -0.39
VCP-201ENST00000358901 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 A0A0D9SG52 128 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 TNFSF12O43508 249 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 ADAM23O75077 832 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 GLCEO94923 617 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 ZNF28P17035 718 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 S100A11P31949 105 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 EVX1P49640 407 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 DGCR2P98153 550 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 DUSP6Q16828 381 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 RFPL4BQ6ZWI9 263 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 LIMS2Q7Z4I7 341 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 MICU1Q9BPX6 476 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 TMEM43Q9BTV4 400 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 OR52A5Q9H2C5 316 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 WDPCPO95876 746 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 CSF3P09919 207 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 RPS27AP62979 156 aaKnown RBP12.64□□□□□ -0.39
VCP-201ENST00000358901 UBA52P62987 128 aaKnown RBP12.64□□□□□ -0.39
VCP-201ENST00000358901 TPBGQ13641 420 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 KIAA0040Q15053 153 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
VCP-201ENST00000358901 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 BCL2L10Q9HD36 194 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 SPTA1P02549 2419 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 TRAV36DV7A0A075B6V5 113 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 TMED7-TICAM2A0A0A6YYA0 188 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 A0A0B4J2A0 478 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 H3BUI4 141 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 FGF17O60258 216 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 HEPHL1Q6MZM0 1159 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 FRMD1Q8N878 549 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
VCP-201ENST00000358901 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms