RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RIPK1Q13546 671 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 LRRC36Q1X8D7 754 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 GALNT5Q7Z7M9 940 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
TPM1-206ENST00000358278 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 SFXN3Q9BWM7 321 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 POLDIP3Q9BY77 421 aaKnown RBP13.55□□□□□ -0.24
TPM1-206ENST00000358278 C12orf49Q9H741 205 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 TBC1D23Q9NUY8 699 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 MED29Q9NX70 200 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 COQ3Q9NZJ6 369 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 SLC5A6Q9Y289 635 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 ORC6Q9Y5N6 252 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 USP9XQ93008 2570 aaPredicted RBP13.54□□□□□ -0.24
TPM1-206ENST00000358278 SOCS2O14508 198 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 ATP6V1G2O95670 118 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 IFNGR1P15260 489 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 ZNF26P17031 533 aaPredicted RBP13.54□□□□□ -0.24
TPM1-206ENST00000358278 PEX2P28328 305 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 SLC6A6P31641 620 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 DAP3P51398 398 aaKnown RBP13.54□□□□□ -0.24
TPM1-206ENST00000358278 FXYD6P3P58550 94 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 DAG1Q14118 895 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 GUSBP1Q15486 140 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 RFX4Q33E94 735 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 SLC36A3Q495N2 470 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 CLEC12AQ5QGZ9 265 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 KDM4DQ6B0I6 523 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 CASP12Q6UXS9 341 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 THSD4Q6ZMP0 1018 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 KIF18BQ86Y91 864 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 TEX47Q8TBZ9 253 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 ZNF385AQ96PM9 386 aaKnown RBP13.54□□□□□ -0.24
TPM1-206ENST00000358278 KATNB1Q9BVA0 655 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 IFT27Q9BW83 186 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 IL20Q9NYY1 176 aa13.54□□□□□ -0.24
TPM1-206ENST00000358278 HELZ2Q9BYK8 2649 aaKnown RBP13.54□□□□□ -0.24
TPM1-206ENST00000358278 MRPL33O75394 65 aaKnown RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 TNFSF13O75888 250 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 BCL10O95999 233 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 CD14P08571 375 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 OSMP13725 252 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 BMP5P22003 454 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 POU1F1P28069 291 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 OPRM1P35372 400 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 KIR2DL2P43627 348 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 ALDH3A2P51648 485 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 MELKQ14680 651 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ACKR1Q16570 336 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 LPCAT4Q643R3 524 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 VWA1Q6PCB0 445 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 CCDC71Q8IV32 467 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 OR6K3Q8NGY3 331 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 GPX7Q96SL4 187 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 PLA2G12AQ9BZM1 189 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ENKD1Q9H0I2 346 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 PARPBPQ9NWS1 579 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 RNF6Q9Y252 685 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ADAM18Q9Y3Q7 739 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 J3QKU1 62 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 DVL2O14641 736 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.241e-8■■□□□ 11.9
TPM1-206ENST00000358278 ALPLP05186 524 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 SMSP52788 366 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 BIDP55957 195 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ERVK-25P63136 954 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ADORA2A-AS1P86434 159 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 AAED1Q7RTV5 226 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ZNF100Q8IYN0 542 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ZIC4Q8N9L1 334 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 LRRC75AQ8NAA5 344 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 TMEM45BQ96B21 275 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 EMC6Q9BV81 110 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 TSSK6Q9BXA6 273 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 TXNIPQ9H3M7 391 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 GRHPRQ9UBQ7 328 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 ZNF629Q9UEG4 869 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 ERRFI1Q9UJM3 462 aaPredicted RBP13.53□□□□□ -0.24
TPM1-206ENST00000358278 RCE1Q9Y256 329 aa13.53□□□□□ -0.24
TPM1-206ENST00000358278 TENM4Q6N022 2769 aa13.52□□□□□ -0.25
TPM1-206ENST00000358278 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
TPM1-206ENST00000358278 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
TPM1-206ENST00000358278 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
TPM1-206ENST00000358278 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.25
TPM1-206ENST00000358278 MITFO75030 526 aaPredicted RBP13.52□□□□□ -0.25
TPM1-206ENST00000358278 PPP1R3DO95685 299 aa13.52□□□□□ -0.25
TPM1-206ENST00000358278 TP53P04637 393 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms