RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ACVR1CQ8NER5 493 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 ULBP2Q9BZM5 246 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 PURGQ9UJV8 347 aaKnown RBP10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 OTOFQ9HC10 1997 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 SLC9B1P1A6NJY1 282 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 OR52A4PA6NMU1 304 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 SNRPGP62308 76 aaKnown RBP10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 HOXC5Q00444 222 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 PCK2Q16822 640 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 CORO6Q6QEF8 472 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 DDX31Q9H8H2 851 aaKnown RBP10.7□□□□□ -0.7
SPTBN1-202ENST00000356805 MED1Q15648 1581 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 BCAT2O15382 392 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 HNRNPA1P09651 372 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 EDDM3BP56851 147 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 PLAC9Q5JTB6 97 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF322Q6U7Q0 402 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 GCNT2Q8N0V5 402 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 MMP21Q8N119 569 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 KDM8Q8N371 416 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 BPIFB2Q8N4F0 458 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SLC35B4Q969S0 331 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 RNF170Q96K19 258 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 VPS25Q9BRG1 176 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 LRIT2A6NDA9 550 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 BTBD17A6NE02 478 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 TMEM212A6NML5 194 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 POU3F1Q03052 451 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 MRPL10Q7Z7H8 261 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 FAM185AQ8N0U4 392 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ISL2Q96A47 359 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 MED18Q9BUE0 208 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 C20orf85Q9H1P6 137 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 NRIP3Q9NQ35 241 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 CD207Q9UJ71 328 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 TMEM269A0A1B0GVZ9 245 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 PRAMEF4O60810 478 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SNCGO76070 127 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 GPRIN1Q7Z2K8 1008 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SLC6A17Q9H1V8 727 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 PELI2Q9HAT8 420 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 OSGIN1Q9UJX0 560 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 CYTIPO60759 359 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 PCSK6P29122 969 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 GPLD1P80108 840 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ENTPD8Q5MY95 495 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 FAM58AQ8N1B3 248 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 DUSP23Q9BVJ7 150 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ELOVL3Q9HB03 270 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF816-ZNF321PA0A0X1KG74 233 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF840PA6NDX5 716 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF587BE7ETH6 402 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 K7EQM0 130 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 PGGHGQ32M88 737 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF321PQ8N8H1 164 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 OR52N1Q8NH53 320 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 C14orf79Q96F83 325 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 TGIF2Q9GZN2 237 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.69□□□□□ -0.75e-6■■■■■ 27.6
SPTBN1-202ENST00000356805 NOSIPQ9Y314 301 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 FAM183AA6NL82 134 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SUSD5O60279 629 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SORBS2O94875 1100 aaKnown RBP10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 AHRP35869 848 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 GZMKP49863 264 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 P2RX3P56373 397 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SFXN4Q6P4A7 337 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 LILRA2Q8N149 483 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF566Q969W8 418 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SEMA6CQ9H3T2 930 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 DMRT3Q9NQL9 472 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 SLC45A1Q9Y2W3 748 aa10.69□□□□□ -0.7
SPTBN1-202ENST00000356805 ACOT8O14734 319 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 TERTO14746 1132 aaKnown RBP10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 OLFM2O95897 454 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 BPIFA2Q96DR5 249 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 NECTIN4Q96NY8 510 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 IL23AQ9NPF7 189 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 EMCNQ9ULC0 261 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 JTBO76095 146 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 ARHGAP11BQ3KRB8 267 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 OR7E24Q6IFN5 339 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 TMUB2Q71RG4 321 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 CDRT4Q8N9R6 151 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 TMEM174Q8WUU8 243 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 CPNE4Q96A23 557 aaPredicted RBP10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 APOOQ9BUR5 198 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 C12orf49Q9H741 205 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 ATG2BQ96BY7 2078 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 PRAMEF26H0Y7S4 382 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 TRIM77I1YAP6 450 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 NXPH2O95156 264 aa10.68□□□□□ -0.7
SPTBN1-202ENST00000356805 ATP1B1P05026 303 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms