RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 OR5K2Q8NHB8 316 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 NAA50Q9GZZ1 169 aaKnown RBP13.8□□□□□ -0.2
LMX1B-201ENST00000355497 C20orf85Q9H1P6 137 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 ERVMER34-1Q9H9K5 563 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 DECR2Q9NUI1 292 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 GDE1Q9NZC3 331 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 SHPRHQ149N8 1683 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 IGHEP01854 428 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 CBR1P16152 277 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 HOXC13P31276 330 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 RPE65Q16518 533 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 STEAP1BQ6NZ63 245 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 PSORS1C1Q9UIG5 152 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 P2RY10O00398 339 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 HSD17B6O14756 317 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 PRAMEF4O60810 478 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 NXPH3O95157 252 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 OR8B8Q15620 311 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 GGTA1PQ4G0N0 100 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM184BQ9Y519 407 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SERINC4A6NH21 518 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 PAX6P26367 422 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SHC1P29353 583 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 PDLIM5Q96HC4 596 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 TNFRSF13CQ96RJ3 184 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 MTCH1Q9NZJ7 389 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 PPP6CO00743 305 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 CSO75390 466 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 GSTP1P09211 210 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SSR4P51571 173 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SLC51BQ86UW2 128 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 LIPHQ8WWY8 451 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 ATOH8Q96SQ7 321 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 BTBD17A6NE02 478 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 PAPLNO95428 1278 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 TCRBP04435 133 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 HIST2H3AQ71DI3 136 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SIAH3Q8IW03 269 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 OR5D18Q8NGL1 313 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 DIMT1Q9UNQ2 313 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 C1SP09871 688 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 MAT1AQ00266 395 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 OVCH1Q7RTY7 1134 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 UBR1Q8IWV7 1749 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 H0YGG7 62 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 NXPH2O95156 264 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 PMS2P2O95744 297 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF133P52736 654 aaPredicted RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 CDKN3Q16667 212 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 FAM111BQ6SJ93 734 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 DPPA2Q7Z7J5 298 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 C19orf47Q8N9M1 422 aaKnown RBP13.79□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM106AQ96A25 262 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 EGLN2Q96KS0 407 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 ULBP3Q9BZM4 244 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 SLCO5A1Q9H2Y9 848 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 B3GAT1Q9P2W7 334 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
LMX1B-201ENST00000355497 RGS11O94810 467 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 S100A11P31949 105 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 ALKBH1Q13686 389 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 GINS3Q9BRX5 216 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 M0QYG6 137 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 PPP1R2P9O14990 202 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 SLC31A2O15432 143 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 SNCGO76070 127 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TAF9Q16594 264 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 FXNQ16595 210 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 IAH1Q2TAA2 248 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 ARHGAP11BQ3KRB8 267 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 ADGRE4PQ86SQ3 457 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 RPL3LQ92901 407 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 NAT6Q93015 286 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 OR52A1Q9UKL2 312 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 KLK4Q9Y5K2 254 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 IGKV6D-21A0A0A0MT36 114 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 LOC100289279A0A1B0GTE1 492 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 SCRG1O75711 98 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 DEFA4P12838 97 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 BIDP55957 195 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 SLC7A9P82251 487 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TBPL2Q6SJ96 375 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms