RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 INTS14Q96SY0 518 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 GALR3O60755 368 aaPredicted RBP11.35□□□□□ -0.59
COLCA1-201ENST00000355430 F13BP05160 661 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 RAP2BP61225 183 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 STK11Q15831 433 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 DEFB109BQ30KR1 87 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 CD276Q5ZPR3 534 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 METRNLQ641Q3 311 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 IQCF2Q8IXL9 164 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 OR1J4Q8NGS1 313 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 SLC35A4Q96G79 324 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 SEC22CQ9BRL7 303 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 A0A1B0GWA3 101 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 A6NLC8 198 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 KLK10O43240 276 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 VNN2O95498 520 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 MT-CO3P00414 261 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 INHBBP09529 407 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 RAB40ALP0C0E4 278 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 CYB561P49447 251 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 DGCR2P98153 550 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 SORDQ00796 357 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ZP2Q05996 745 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ERV3-1Q14264 604 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 RAB40AQ8WXH6 277 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ARSGQ96EG1 525 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 THOC3Q96J01 351 aaKnown RBP11.35□□□□□ -0.59
COLCA1-201ENST00000355430 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
COLCA1-201ENST00000355430 VDAC3Q9Y277 283 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 B8ZZF3 427 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 H7C1C5 153 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 C1QCP02747 245 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 PKLRP30613 574 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 GCH1P30793 250 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 LCN6P62502 163 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 GXYLT1Q4G148 440 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 GSG1LQ6UXU4 331 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 SMAP2Q8WU79 429 aaPredicted RBP11.35□□□□□ -0.59
COLCA1-201ENST00000355430 PMM1Q92871 262 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 ISYNA1Q9NPH2 558 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 B3GNT2Q9NY97 397 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 SLC7A11Q9UPY5 501 aa11.35□□□□□ -0.59
COLCA1-201ENST00000355430 IGLV3-16A0A075B6K0 115 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 LMO7DNF2Z398 122 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 SURF4O15260 269 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 AQP2P41181 271 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 MAT1AQ00266 395 aaKnown RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TLE3Q04726 772 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 DUSP5Q16690 384 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM64Q6YI46 380 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 OR6V1Q8N148 313 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ELP5Q8TE02 316 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF578Q96N58 590 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TEAD3Q99594 435 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 FGF20Q9NP95 211 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 CBLCQ9ULV8 474 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 A4GNTQ9UNA3 340 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TEX51A0A1B0GUA7 166 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM72A0PK05 275 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 PRRG2O14669 202 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 OR2T1O43869 369 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 GPRIN2O60269 458 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 AMY2BP19961 511 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ETV6P41212 452 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ARHGDIBP52566 201 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 GPR50Q13585 617 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TRA2AQ13595 282 aaKnown RBP eCLIP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 NKAPLQ5M9Q1 402 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 PRAMEF8Q5VWM4 474 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 PRAMEF7Q5VXH5 474 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TIGD3Q6B0B8 471 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF701Q9NV72 531 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 SELENOFO60613 162 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TPOP07202 933 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 SLC2A5P22732 501 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TNFSF4P23510 183 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TPBGQ13641 420 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM71Q6P5X7 295 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 OR13C5Q8NGS8 318 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ALG14Q96F25 216 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 OR52A5Q9H2C5 316 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 KCNN3Q9UGI6 736 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 WASF3Q9UPY6 502 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF736B4DX44 427 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 FCMRO60667 390 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 APLNRP35414 380 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 CHRFAM7AQ494W8 412 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 AGBL4Q5VU57 503 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 NIPAL3Q6P499 406 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 CCDC74BQ96LY2 380 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 EVA1AQ9H8M9 152 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 FBXO9Q9UK97 447 aaPredicted RBP11.34□□□□□ -0.59
COLCA1-201ENST00000355430 LTBP1Q14766 1721 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 A0A0B4J203 849 aa11.34□□□□□ -0.59
COLCA1-201ENST00000355430 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms