RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CDC42P60953 191 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ILKQ13418 452 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 C1DQ13901 141 aaKnown RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 PDZD11Q5EBL8 140 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 RHBDD2Q6NTF9 364 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 AQP11Q8NBQ7 271 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 OR5T2Q8NGG2 359 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 GTF3AQ92664 365 aaKnown RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 TBC1D20Q96BZ9 403 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 MMABQ96EY8 250 aaPredicted RBP9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SCMH1Q96GD3 660 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM68Q96MH6 324 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 ABHD1Q96SE0 405 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 SYNDIG1Q9H7V2 258 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 KLHL1Q9NR64 748 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 TVP23BQ9NYZ1 205 aa9.24□□□□□ -0.93
SYNE1-203ENST00000354674 UNC13CQ8NB66 2214 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 WRBO00258 174 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TLX2O43763 284 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 HYAL3O43820 417 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TGM6O95932 706 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 C8orf89P0DMQ9 161 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 MST1P26927 711 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PPP2R1BP30154 601 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 BTCP35070 178 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 BLOC1S1P78537 153 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 VEZF1Q14119 521 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 VMACQ2NL98 169 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TTLL10Q6ZVT0 673 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SYT9Q86SS6 491 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TGIF2LXQ8IUE1 241 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TOMM5Q8N4H5 51 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 OR51Q1Q8NH59 317 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 OR5AK3PQ8NH89 298 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 OR1F2PQ96R84 312 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PITX2Q99697 317 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 NDC1Q9BTX1 674 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SEMA3GQ9NS98 782 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SRPK3Q9UPE1 567 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 GPR52Q9Y2T5 361 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 MEIKINA0A087WXM9 373 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 A0A1B0GX78 115 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 C1orf196B1AJZ1 125 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 CTNSO60931 367 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SERPINA3P01011 423 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 EIF4EP06730 217 aaKnown RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 COX5BP10606 129 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 FGF5P12034 268 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PTHLHP12272 177 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PRF1P14222 555 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PTNP21246 168 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 CCKBRP32239 447 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 CHI3L1P36222 383 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 STARP49675 285 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 MAT1AQ00266 395 aaKnown RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 EIF2S3LQ2VIR3 472 aaKnown RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 LRRC37A5PQ49AS3 106 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PRAMEF17Q5VTA0 474 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 C6orf120Q7Z4R8 191 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 NEIL3Q8TAT5 605 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 OR6C1Q96RD1 312 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 FUZQ9BT04 418 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM121BQ9BXQ6 578 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-203ENST00000354674 LANCL2Q9NS86 450 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 PISDQ9UG56 409 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 WASF3Q9UPY6 502 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 NUP210LQ5VU65 1888 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 SPEGQ15772 3267 aa9.23□□□□□ -0.93
SYNE1-203ENST00000354674 MEX3AA1L020 520 aaKnown RBP9.22□□□□□ -0.93
SYNE1-203ENST00000354674 TGFBR3LH3BV60 316 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 KCNAB3O43448 404 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 BRINP1O60477 761 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 FZD7O75084 574 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SLC35E2P0CK97 266 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PRG2P13727 222 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 HPGDP15428 266 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PCGF2P35227 344 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OR10A3P58181 314 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PPP3R1P63098 170 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 DGCR2P98153 550 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 MGAT2Q10469 447 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PGBD2Q6P3X8 592 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 SLC29A4Q7RTT9 530 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 HMGN2P46Q86SG4 172 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PIP4P1Q86T03 277 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OR4N5Q8IXE1 308 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OR2L13Q8N349 312 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 OR9A2Q8NGT5 310 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CTHRC1Q96CG8 243 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CDC6Q99741 560 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ATF6BQ99941 703 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 PRR14Q9BWN1 585 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 TSSK6Q9BXA6 273 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 CTPS2Q9NRF8 586 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ZFP57Q9NU63 452 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 ASF1BQ9NVP2 202 aa9.22□□□□□ -0.93
SYNE1-203ENST00000354674 RPS6KA6Q9UK32 745 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms