RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 TLN1Q9Y490 2541 aaKnown RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 CACNA1IQ9P0X4 2223 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 GLOD5A6NK44 160 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 C4orf51C9J302 202 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 F5H5P2 479 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 PIN1P1O15428 100 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 FCMRO60667 390 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 SDC3O75056 442 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 IFNGP01579 166 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 VSIG10L2P0DP72 767 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 RPA2P15927 270 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 ZNF3P17036 446 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 FUT1P19526 365 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 PTGER1P34995 402 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 BCL6P41182 706 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 MC3RP41968 323 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 P2RX1P51575 399 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 MAZP56270 477 aaKnown RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 S100A12P80511 92 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 HTRA4P83105 476 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 PRDX1Q06830 199 aaKnown RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 CRMP1Q14194 572 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 OR1Q1Q15612 314 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 TMEM52BQ4KMG9 183 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 CLVS2Q5SYC1 327 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 MFSD12Q6NUT3 480 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 AMZ2Q86W34 360 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 ACOT4Q8N9L9 421 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 POMGNT2Q8NAT1 580 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 OR13C2Q8NGS9 318 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 OR9A2Q8NGT5 310 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 PFN4Q8NHR9 129 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 CYB5D2Q8WUJ1 264 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 PIGKQ92643 395 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 MRPL48Q96GC5 212 aaKnown RBP6.87□□□□□ -1.31
C11orf54-202ENST00000354421 COX14Q96I36 57 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 MS4A4EQ96PG1 132 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 DERL3Q96Q80 235 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 SLC38A3Q99624 504 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 NRTNQ99748 197 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 EVA1AQ9H8M9 152 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 SPHK2Q9NRA0 654 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 FBXL2Q9UKC9 423 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 ETV7Q9Y603 341 aa6.87□□□□□ -1.31
C11orf54-202ENST00000354421 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 ARPC4-TTLL3A0A0A6YYG9 625 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 IGKV1-8A0A0C4DH67 115 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 TCRBV16S1A1N1A0A5B0 115 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 CDC123O75794 336 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 UBBP0CG47 229 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 UBCP0CG48 685 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 C8orf89P0DMQ9 161 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 C6P13671 934 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 SRMP19623 302 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 EDNRAP25101 427 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 HTR2AP28223 471 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 MPGP29372 298 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 SLC6A6P31641 620 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 TSFMP43897 325 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 HOXA1P49639 335 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 SLC16A1P53985 500 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 RPS27AP62979 156 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 UBA52P62987 128 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 CBFBQ13951 182 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 LPAL2Q16609 132 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 POM121L1PQ3SYA9 428 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 AMZ1Q400G9 498 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 EXOSC6Q5RKV6 272 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 HES5Q5TA89 166 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 C18orf63Q68DL7 685 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 OR7E24Q6IFN5 339 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 PWWP2BQ6NUJ5 590 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 ARHGAP11AQ6P4F7 1023 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 ADAMTSL4Q6UY14 1074 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 NHLRC1Q6VVB1 395 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 NRROSQ86YC3 692 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 RAB42Q8N4Z0 105 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 LINC01555Q8NAE3 123 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 CAMKVQ8NCB2 501 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 TMIEQ8NEW7 156 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 PXT1Q8NFP0 134 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 OR2AK2Q8NG84 335 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 OR4C6Q8NH72 309 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 CDS1Q92903 461 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 HAVCR1Q96D42 359 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 BPIFA2Q96DR5 249 aa6.86□□□□□ -1.31
C11orf54-202ENST00000354421 S100A16Q96FQ6 103 aaKnown RBP6.86□□□□□ -1.31
C11orf54-202ENST00000354421 SIPA1Q96FS4 1042 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms