RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SCGNO76038 276 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CLDN9O95484 217 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NDUFB10O96000 172 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 IGHG4P01861 327 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PRSS1P07477 247 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MELTFP08582 738 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 H2BFMP0C1H6 154 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RBMY1DP0C7P1 496 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RBMY1A1P0DJD3 496 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NPIPA8P0DM63 369 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CCKARP32238 428 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GPR4P46093 362 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TMED10P49755 219 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CRYBA2P53672 197 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PUDPQ08623 228 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TSC22D1Q15714 1073 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NDUFA9Q16795 377 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MOGAT2Q3SYC2 334 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 REP15Q6BDI9 236 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DEGS2Q6QHC5 323 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 C3P1Q6ZMU1 363 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR10A7Q8NGE5 316 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR56A4Q8NGH8 313 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR9G4Q8NGQ1 327 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DYDC1Q8WWB3 177 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SORT1Q99523 831 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 LITAFQ99732 161 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NAT9Q9BTE0 207 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACTR6Q9GZN1 396 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DNTTIP1Q9H147 329 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ADNPQ9H2P0 1102 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TMPRSS5Q9H3S3 457 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MYEF2Q9P2K5 600 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 WRAP73Q9P2S5 460 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GAB2Q9UQC2 676 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ZDBF2Q9HCK1 2354 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TRPM7Q96QT4 1865 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FASNP49327 2511 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PLCH2O75038 1416 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 EEA1Q15075 1411 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NSG1A0A0A6YYJ2 146 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 IGHV2-70DA0A0C4DH43 119 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MYMKA6NI61 221 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PP2D1A8MPX8 630 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RNF212BA8MTL3 300 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SHISA9B4DS77 424 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 H0YHG0 523 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CHST1O43916 411 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 POP4O95707 220 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINE2P07093 398 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC35E2P0CK97 266 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 STAG3L2P0CL84 134 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 BCKDHAP12694 445 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ATP6V1B2P21281 511 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PTGDSP41222 190 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KCNJ4P48050 445 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC26A2P50443 739 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ARHGDIBP52566 201 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ATP6V0D1P61421 351 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RPS15AP62244 130 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 KCNJ2P63252 427 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TEX44Q53QW1 395 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PPM1LQ5SGD2 360 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CEP85LQ5SZL2 805 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 LGSNQ5TDP6 509 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 REEP3Q6NUK4 255 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CENPQQ7L2Z9 268 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 VPS36Q86VN1 386 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GPR65Q8IYL9 337 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MCOLN2Q8IZK6 566 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PUSL1Q8N0Z8 303 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NUP37Q8NFH4 326 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 OR4D6Q8NGJ1 314 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC38A4Q969I6 547 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RPUSD4Q96CM3 377 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CLCC1Q96S66 551 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RGCCQ9H4X1 137 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CWH43Q9H720 699 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ACP6Q9NPH0 428 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 BFARQ9NZS9 450 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 PHF11Q9UIL8 331 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 GGA2Q9UJY4 613 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RBMX2Q9Y388 322 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CPQQ9Y646 472 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CLTCL1P53675 1640 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SETD2Q9BYW2 2564 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NKTRP30414 1462 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MUC6Q6W4X9 2439 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 A0A0G2JLW4 131 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 MPTX1A8MV57 137 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 DCTN6O00399 190 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC9A3R1O14745 358 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ZG16O60844 167 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TRIM3O75382 744 aaPredicted RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 FCN3O75636 299 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 SLC2A10O95528 541 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 CAVIN2O95810 425 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 IGHG1P01857 330 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 HSMCR30P0CW71 290 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 LAMP1P11279 417 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms