RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 WNT3P56703 355 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 NINQ8N4C6 2090 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 LOC102725191A0A1B0GVB3 256 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 SERPINA5P05154 406 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 HIST1H1CP16403 213 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 PRPH2P23942 346 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 STOMP27105 288 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 PPIAP62937 165 aaKnown RBP12.55□□□□□ -0.4
SMC6-201ENST00000351948 PLK5Q496M5 336 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 DHRS4L2Q6PKH6 230 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 XKRXQ6PP77 449 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 COX15Q7KZN9 410 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 MSRB3Q8IXL7 192 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 TMEM106AQ96A25 262 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 MIB2Q96AX9 1013 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 GPR179Q6PRD1 2367 aa12.55□□□□□ -0.4
SMC6-201ENST00000351948 BRCA1P38398 1863 aaKnown RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 P2RY10O00398 339 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 NKG7Q16617 165 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 CCBE1Q6UXH8 406 aaPredicted RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 INO80EQ8NBZ0 244 aaPredicted RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 AGAP14A8MT82 685 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 LRRTM2O43300 516 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ABHD16AO95870 558 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ACKR1Q16570 336 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 RHOXF1Q8NHV9 184 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 EVA1AQ9H8M9 152 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 WASF3Q9UPY6 502 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ISPDA4D126 451 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 MEGF11A6BM72 1044 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 HSPB6O14558 160 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 PRAMEF4O60810 478 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 SOD1P00441 154 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 MLC1Q15049 377 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 PRAMEF9Q5VWM5 478 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 DCDC5Q6ZRR9 648 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ACBD4Q8NC06 268 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 OR52I1Q8NGK6 324 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 SYNPRQ8TBG9 265 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 PLEKHJ1Q9NW61 149 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 TMA7Q9Y2S6 64 aaKnown RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ZNF44P15621 663 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 DMWDQ09019 674 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 PCGF3Q3KNV8 242 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 ARSJQ5FYB0 599 aaPredicted RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 PAQR6Q6TCH4 344 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 CSNK2A3Q8NEV1 391 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 HINT3Q9NQE9 182 aaKnown RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 ZNF223Q9UK11 482 aaPredicted RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
SMC6-201ENST00000351948 V9GY05 133 aa12.54□□□□□ -0.4
SMC6-201ENST00000351948 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 HOXC4P09017 264 aaPredicted RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 CT62P0C5K7 136 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 LIPCP11150 499 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 MLLT11Q13015 90 aaPredicted RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 RIMKLAQ8IXN7 391 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 SGCZQ96LD1 299 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 PDCD1LG2Q9BQ51 273 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 B3GALT1Q9Y5Z6 326 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 CEPT1Q9Y6K0 416 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 KNG1P01042 644 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 PCBD1P61457 104 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 ACOT12Q8WYK0 555 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 GNRHR2Q96P88 292 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 ZNF224Q9NZL3 707 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 APEHP13798 732 aaKnown RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 ABCD3P28288 659 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 SHC1P29353 583 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 PRSS3P35030 304 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 ZXDAP98168 799 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
SMC6-201ENST00000351948 FOXF1Q12946 379 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 MFAP5Q13361 173 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 OR10G3Q8NGC4 313 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 WDR76Q9H967 626 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 DYNLRB1Q9NP97 96 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 A0A096LPE4 126 aa12.53□□□□□ -0.4
SMC6-201ENST00000351948 A0A1W2PPZ6 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms