RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 OR52E1Q8NGJ3 308 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 SLC22A8Q8TCC7 542 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RXFP4Q8TDU9 374 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 TMEM239Q8WW34 195 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RAB40AQ8WXH6 277 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 ASB16Q96NS5 453 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 MNTQ99583 582 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 MRPS30Q9NP92 439 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 TINAGQ9UJW2 476 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 A0A087WV48 116 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF3P17036 446 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 PEBP1P30086 187 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 DCDP81605 110 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 ZIC1Q15915 447 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 LRRC37A5PQ49AS3 106 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 LY6G6FQ5SQ64 297 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 AVPI1Q5T686 147 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RBMS3Q6XE24 437 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF836Q6ZNA1 936 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 BEST3Q8N1M1 668 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 SFXN5Q8TD22 340 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 DOK4Q8TEW6 326 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 PDCD10Q9BUL8 212 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 TEX101Q9BY14 249 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 TLNRD1Q9H1K6 362 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 CES1P1Q9UKY3 287 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 SIGLEC7Q9Y286 467 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 A0A1W2PP55 124 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SULT1C2O00338 296 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF136P52737 540 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SNRPEP62304 92 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SRSF3P84103 164 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SNTB1Q13884 538 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 PAN3Q58A45 887 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 YOD1Q5VVQ6 348 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MRM1Q6IN84 353 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 TMEM71Q6P5X7 295 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 ARMC10Q8N2F6 343 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SLC35A4Q96G79 324 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 C2orf42Q9NWW7 574 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 HAO2Q9NYQ3 351 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MYEF2Q9P2K5 600 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 APOBEC3BQ9UH17 382 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 KNL1Q8NG31 2342 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MEX3AA1L020 520 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 PTGFRP43088 359 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 TRA2BP62995 288 aaKnown RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 ATXN7L3Q14CW9 347 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 H3F3CQ6NXT2 135 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MAMSTRQ6ZN01 415 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 FRRS1Q6ZNA5 592 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 KCNRGQ8N5I3 272 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SLC16A11Q8NCK7 471 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 SDR9C7Q8NEX9 313 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 OR6N1Q8NGY5 312 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 BPIFA2Q96DR5 249 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 VRK1Q99986 396 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-202ENST00000348987 IGFLR1Q9H665 355 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 EXO5Q9H790 373 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 CALML5Q9NZT1 146 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 MKL2Q9ULH7 1088 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF337Q9Y3M9 751 aa17.04■□□□□ 0.32
SCARF1-202ENST00000348987 OR6C76A6NM76 312 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 EMC8O43402 210 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 CTNSO60931 367 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 F3P13726 295 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 CBR1P16152 277 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 HTR2AP28223 471 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 NPBWR1P48145 328 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 C2orf27AQ580R0 203 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 KRT77Q7Z794 578 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 OR8S1Q8NH09 359 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 DVL3Q92997 716 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 BCL2L14Q9BZR8 327 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 TINAGL1Q9GZM7 467 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 H7C417 338 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 GLSO94925 669 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 MPIP34949 423 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 ACTA2P62736 377 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 ACTG2P63267 376 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 GUCA2AQ02747 115 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 SLC48A1Q6P1K1 146 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF704Q6ZNC4 412 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 DMBX1Q8NFW5 382 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 OR2L3Q8NG85 312 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 ADAMTS15Q8TE58 950 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 RAB7BQ96AH8 199 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 PITHD1Q9GZP4 211 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 GAREM1Q9H706 876 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 APMAPQ9HDC9 416 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 MTFP1Q9UDX5 166 aa17.03■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF629Q9UEG4 869 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 GPN3Q9UHW5 284 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-202ENST00000348987 RAB19A4D1S5 217 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 OR5H14A6NHG9 310 aa17.02■□□□□ 0.32
SCARF1-202ENST00000348987 AGTR1P30556 359 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms