RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NDRG4Q9ULP0 352 aaKnown RBP14.24□□□□□ -0.13
RAB5C-201ENST00000346213 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 EMC9Q9Y3B6 208 aa14.24□□□□□ -0.13
RAB5C-201ENST00000346213 AHCYL1O43865 530 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 PRKAR1BP31321 381 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 APOBEC1P41238 236 aaKnown RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 CTBP2P56545 445 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 CD47Q08722 323 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 TOP3AQ13472 1001 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 C6orf141Q5SZD1 244 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 DEF8Q6ZN54 512 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 TSPYL5Q86VY4 417 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 CXorf67Q86X51 503 aaPredicted RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 PEX5LQ8IYB4 626 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 TMEM234Q8WY98 164 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 C3orf49Q96BT1 292 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 ARHGDIGQ99819 225 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 A4GNTQ9UNA3 340 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 IFT52Q9Y366 437 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 GMPPBQ9Y5P6 360 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 M0R3H8 397 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 H1F0P07305 194 aaKnown RBP14.23□□□□□ -0.13
RAB5C-201ENST00000346213 THBS1P07996 1170 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 TFPIP10646 304 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 CBLP22681 906 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 SLC1A3P43003 542 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 ALDH3B2P48448 385 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 P2RY4P51582 365 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 CDH15P55291 814 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 H3F3AP84243 136 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 OR6T1Q8NGN1 323 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 PMM1Q92871 262 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 APOL4Q9BPW4 351 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF556Q9HAH1 456 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 RHCGQ9UBD6 479 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 SEC14L4Q9UDX3 406 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 TMCC3Q9ULS5 477 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 FREM1Q5H8C1 2179 aa14.23□□□□□ -0.13
RAB5C-201ENST00000346213 ABCA4P78363 2273 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 GJE1A6NN92 205 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 C16orf97H3BN30 126 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 SULT2B1O00204 365 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 KLF4O43474 513 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 FUT4P22083 530 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 CRYGSP22914 178 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 PCYT1AP49585 367 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 POLR2HP52434 150 aaKnown RBP14.22□□□□□ -0.13
RAB5C-201ENST00000346213 EGR4Q05215 589 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 RASGEF1BQ0VAM2 473 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 PDSS1Q5T2R2 415 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF770Q6IQ21 691 aaPredicted RBP14.22□□□□□ -0.13
RAB5C-201ENST00000346213 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 PARP8Q8N3A8 854 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 OR9Q2Q8NGE9 314 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 HRASLS5Q96KN8 279 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 PRRC1Q96M27 445 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 NIPSNAP1Q9BPW8 284 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 FUZQ9BT04 418 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 ELOVL5Q9NYP7 299 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 ENOPH1Q9UHY7 261 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 ST6GALNAC2Q9UJ37 374 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF232Q9UNY5 417 aa14.22□□□□□ -0.13
RAB5C-201ENST00000346213 TRBV4-1A0A0J9YWV2 114 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 A0A1W2PRQ8 180 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 NPIPB7O75200 414 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 PMS2P2O95744 297 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 PLAUP00749 431 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 YES1P07947 543 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 PTNP21246 168 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 CRHBPP24387 322 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 CDK5R2Q13319 367 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 DGCR6Q14129 220 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 RNPS1Q15287 305 aaKnown RBP14.21□□□□□ -0.13
RAB5C-201ENST00000346213 EEF1A1P5Q5VTE0 462 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 LAIR2Q6ISS4 152 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 CADM2Q8N3J6 435 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 SLC25A43Q8WUT9 341 aaPredicted RBP14.21□□□□□ -0.13
RAB5C-201ENST00000346213 ZNF566Q969W8 418 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 LRRC46Q96FV0 321 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 PTDSS2Q9BVG9 487 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 GLRX2Q9NS18 164 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 SLC13A4Q9UKG4 626 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 MGAT4BQ9UQ53 548 aa14.21□□□□□ -0.13
RAB5C-201ENST00000346213 IGKV1D-42A0A075B6H8 117 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 IGKV3D-15A0A087WSY6 115 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 ADAP00813 363 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 IGHV3-9P01782 118 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 CCDC159P0C7I6 412 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 EPHA2P29317 976 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 PEX19P40855 299 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 GABARAPL2P60520 117 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 CXCR4P61073 352 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 IL5RAQ01344 420 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 PIN1Q13526 163 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-201ENST00000346213 LARS2Q15031 903 aaKnown RBP14.2□□□□□ -0.14
RAB5C-201ENST00000346213 NPTX1Q15818 432 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 FGD3Q5JSP0 725 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 P3H2Q8IVL5 708 aa14.2□□□□□ -0.14
RAB5C-201ENST00000346213 LINC00471Q8N535 108 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms