RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OMGP23515 440 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 RBM39Q14498 530 aaKnown RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 TMEM184AQ6ZMB5 413 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 SLC16A12Q6ZSM3 486 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 PRR22Q8IZ63 422 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 CMSS1Q9BQ75 279 aaKnown RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 C20orf24Q9BUV8 137 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 UBQLN4Q9NRR5 601 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 GPR55Q9Y2T6 319 aaPredicted RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 HNRNPA1P09651 372 aaKnown RBP eCLIP16.16■□□□□ 0.18
SPAST-202ENST00000345662 SLC35D3Q5M8T2 416 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 TCEAL8Q8IYN2 117 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 OR10A5Q9H207 317 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 OR10A2Q9H208 303 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 PCYT1BQ9Y5K3 369 aaPredicted RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 A0A1W2PPV4 95 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 KLF8O95600 359 aaPredicted RBP16.16■□□□□ 0.18
SPAST-202ENST00000345662 EFNA3P52797 238 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 HTR3DQ70Z44 454 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 OR5K2Q8NHB8 316 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 GAREM1Q9H706 876 aa16.16■□□□□ 0.18
SPAST-202ENST00000345662 CCDC163A0A0D9SF12 145 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 M0R082 166 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 LPLP06858 475 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 POLR2HP52434 150 aaKnown RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 HHEXQ03014 270 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 FAM69BQ5VUD6 431 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 NAA40Q86UY6 237 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 TMEM99Q8N816 258 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 ARHGAP9Q9BRR9 750 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 NXF5Q9H1B4 397 aaKnown RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 NARFLQ9H6Q4 476 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 ZMAT3Q9HA38 289 aaKnown RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 ZNF286AQ9HBT8 521 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 TMEFF2Q9UIK5 374 aaPredicted RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 FLVCR2Q9UPI3 526 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 IGLV3-10A0A075B6K4 115 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 A0A087WUU8 490 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 A0A1B0GWA3 101 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 B3GALT4O96024 378 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 DIO2Q92813 273 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 CPNE4Q96A23 557 aaPredicted RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 ASB1Q9Y576 335 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 A6NLC8 198 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 H7C1C5 153 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 CNMDO75829 334 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 TXNDC12O95881 172 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 LCN6P62502 163 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 TMEM88Q6PEY1 159 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 SDSLQ96GA7 329 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 CSF3RQ99062 836 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 BHLHE40O14503 412 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 MAGEB4O15481 346 aaPredicted RBP16.15■□□□□ 0.18
SPAST-202ENST00000345662 ACSM4P0C7M7 580 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 MGMTP16455 207 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 TMED6Q8WW62 240 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 SERTAD4Q9NUC0 356 aa16.15■□□□□ 0.18
SPAST-202ENST00000345662 A0A0A6YYC8 382 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 I3L1I5 382 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 ADAMTS4O75173 837 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 OR13C7P0DN81 318 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 MCCD1P59942 119 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 TAAR8Q969N4 342 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 LINC00597Q9H2U6 94 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 GCM1Q9NP62 436 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 HINT3Q9NQE9 182 aaKnown RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 PLEK2Q9NYT0 353 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 RAB22AQ9UL26 194 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 CD80P33681 288 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 UBXN2BQ14CS0 331 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 SLC22A24Q8N4F4 322 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 RSPRY1Q96DX4 576 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 ADOQ96SZ5 270 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 GPR174Q9BXC1 333 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 PATZ1Q9HBE1 687 aaKnown RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 SPATA6Q9NWH7 488 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 OR5H14A6NHG9 310 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 TO15178 435 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 TGM5O43548 720 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 YOD1Q5VVQ6 348 aaPredicted RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 TMPPEQ6ZT21 453 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 OLIG3Q7RTU3 272 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 ZNF511Q8NB15 262 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 RNF170Q96K19 258 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 URGCP-MRPS24S4R325 110 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 A0A0J9YY10 115 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 SLCO2B1O94956 709 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 RHOUQ7L0Q8 258 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 NKAIN4Q8IVV8 208 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 NKAIN3Q8N8D7 197 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 ATF6BQ99941 703 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 SCPEP1Q9HB40 452 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 POMT2Q9UKY4 750 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 MRPS28Q9Y2Q9 187 aaKnown RBP16.14■□□□□ 0.17
SPAST-202ENST00000345662 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
SPAST-202ENST00000345662 FTCDNL1E5RQL4 147 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms