RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 VIPAS39Q9H9C1 493 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 CRLF2Q9HC73 371 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 GPR35Q9HC97 309 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 B3GAT1Q9P2W7 334 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 KCNS2Q9ULS6 477 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 RCE1Q9Y256 329 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 CPSF4LA6NMK7 179 aaKnown RBP10.8□□□□□ -0.68
SGCA-202ENST00000344627 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 B9A039 149 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 C11orf98E9PRG8 122 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 MS4A18H0YCH9 400 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 DYNC1I1O14576 645 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 PHF1O43189 567 aaPredicted RBP10.8□□□□□ -0.68
SGCA-202ENST00000344627 EDF1O60869 148 aaKnown RBP10.8□□□□□ -0.68
SGCA-202ENST00000344627 SEC14L2O76054 403 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 ZNF432O94892 652 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 CECR9P0C854 216 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 SERPINF1P36955 418 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 RBBP4Q09028 425 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 NPRL3Q12980 569 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 SELPLGQ14242 412 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 SWI5Q1ZZU3 235 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 CEACAM16Q2WEN9 425 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 MS4A18Q3C1V0 323 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 FAM166AQ6J272 317 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 SLC46A3Q7Z3Q1 461 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 PTOV1Q86YD1 416 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 CCDC36Q8IYA8 594 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 IL17RDQ8NFM7 739 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 OR4F15Q8NGB8 312 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 OR2M2Q96R28 347 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 WFDC6Q9BQY6 131 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 EVA1AQ9H8M9 152 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 POFUT2Q9Y2G5 429 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 CORINQ9Y5Q5 1042 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 GMEB1Q9Y692 573 aa10.8□□□□□ -0.68
SGCA-202ENST00000344627 ARPC4-TTLL3A0A0A6YYG9 625 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 A0A0B4J2E0 115 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 A0A1B0GX12 115 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 LRRN3E7EW58 273 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 GPRIN2O60269 458 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 TPST2O60704 377 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 LY6HO94772 140 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 HPRP00739 348 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 BGLAPP02818 100 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 CD79AP11912 226 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 HLA-DOBP13765 273 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 H2AFXP16104 143 aaPredicted RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 IDH3GP51553 393 aaPredicted RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 NAAAQ02083 359 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 PUDPQ08623 228 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 CAMK2DQ13557 499 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 EFNB3Q15768 340 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 DUSP7Q16829 419 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 ENTPD8Q5MY95 495 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 LIPNQ5VXI9 398 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 PATL1Q86TB9 770 aaKnown RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 RETREG3Q86VR2 466 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 SLC30A8Q8IWU4 369 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 DPP10Q8N608 796 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 SCAIQ8N9R8 606 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 OR10A6Q8NH74 314 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 NANOS1Q8WY41 292 aaKnown RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 ZNF837Q96EG3 531 aaPredicted RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 CA10Q9NS85 328 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 MED29Q9NX70 200 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 MRPL39Q9NYK5 338 aaKnown RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
SGCA-202ENST00000344627 YLPM1P49750 1951 aaKnown RBP10.79□□□□□ -0.68
SGCA-202ENST00000344627 LOC102725191A0A1B0GVB3 256 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 VWC2LB2RUY7 222 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 RPL36A-HNRNPH2H7BZ11 118 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 KPNA4O00629 521 aaPredicted RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 TRAF3IP2O43734 574 aaPredicted RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 HIST1H2ABP04908 130 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 CELA3BP08861 270 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 OR4A8P0C604 315 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 ADORA3P0DMS8 318 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 IGHV4-31P0DP07 118 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TROVE2P10155 538 aaKnown RBP eCLIP10.78□□□□□ -0.68
SGCA-202ENST00000344627 CBR1P16152 277 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 SRD5A1P18405 259 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 PCMT1P22061 227 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 CALCRP30988 508 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 NR4A2P43354 598 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 PPOXP50336 477 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 PCBP3P57721 371 aaKnown RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 CYLC2Q14093 348 aaPredicted RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 INTS11Q5TA45 600 aaKnown RBP10.78□□□□□ -0.68
SGCA-202ENST00000344627 ZNF613Q6PF04 617 aa10.78□□□□□ -0.68
SGCA-202ENST00000344627 TTC33Q6PID6 262 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms