RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PRSS16Q9NQE7 514 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 SPHK1Q9NYA1 384 aa13.6□□□□□ -0.23
CLCN1-201ENST00000343257 H7C417 338 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 NGFRP08138 427 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 OR2T7P0C7T2 308 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ACTA2P62736 377 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ACTG2P63267 376 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ABHD17CQ6PCB6 329 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF761Q86XN6 746 aaPredicted RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 OR2T27Q8NH04 317 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 PIGMQ9H3S5 423 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 MTFP1Q9UDX5 166 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 STEAP1Q9UHE8 339 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 IKZF2Q9UKS7 526 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 MTCL1Q9Y4B5 1905 aaKnown RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TBC1D3EA0A087X179 549 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TMEM72A0PK05 275 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 CPED1A4D0V7 1026 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 RAB40ALP0C0E4 278 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 GLT8D1Q68CQ7 371 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 KCTD9Q7L273 389 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF627Q7L945 461 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 LURAP1LQ8IV03 231 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 PPP1R1CQ8WVI7 109 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 RAB40AQ8WXH6 277 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 FGF13Q92913 245 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TMEM82A0PJX8 343 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TSPAN11A1L157 253 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 RAB19A4D1S5 217 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TVP23AA6NH52 213 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF749O43361 778 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 SULT1B1O43704 296 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 CTNSO60931 367 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ICOSLGO75144 302 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 OLFM2O95897 454 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 AMY2AP04746 511 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 EEF1A1P68104 462 aaKnown RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 S100A12P80511 92 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 TGIF1Q15583 401 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 ZAR1Q86SH2 424 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 GTPBP8Q8N3Z3 284 aaPredicted RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 DPEP2Q9H4A9 486 aa13.59□□□□□ -0.23
CLCN1-201ENST00000343257 APOBEC3BQ9UH17 382 aaKnown RBP13.59□□□□□ -0.23
CLCN1-201ENST00000343257 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.23
CLCN1-201ENST00000343257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
CLCN1-201ENST00000343257 MEX3AA1L020 520 aaKnown RBP13.58□□□□□ -0.24
CLCN1-201ENST00000343257 OR52A4PA6NMU1 304 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 SSX5O60225 188 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 DOK2O60496 412 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 ALOX12BO75342 701 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 AKAIN1P0CW23 69 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 ZNF28P17035 718 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 PRKCZQ05513 592 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 STEAP1BQ6NZ63 245 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 CD163Q86VB7 1156 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 OR6N1Q8NGY5 312 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
CLCN1-201ENST00000343257 A0A0B4J2A0 478 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 A0A0D9SG52 128 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 BCL2L11O43521 198 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 CD34P28906 385 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 AVPR2P30518 371 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 PRAMEF17Q5VTA0 474 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 UNQ9370/PRO34162Q6UXP9 181 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLCN1-201ENST00000343257 MTSS1LQ765P7 747 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 BIVMQ86UB2 503 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 GALNT16Q8N428 558 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 TMED6Q8WW62 240 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 FOXN4Q96NZ1 517 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 ATG5Q9H1Y0 275 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 SHPKQ9UHJ6 478 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 KCNK6Q9Y257 313 aa13.58□□□□□ -0.24
CLCN1-201ENST00000343257 C13orf42A0A1B0GVH6 325 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 CLEC3AO75596 197 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 SLC6A6P31641 620 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 NTHL1P78549 312 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 EXOSC7Q15024 291 aaKnown RBP13.57□□□□□ -0.24
CLCN1-201ENST00000343257 NR0B2Q15466 257 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 TMEM205Q6UW68 189 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 RNF44Q7L0R7 432 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 PHOSPHO1Q8TCT1 267 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 UTP23Q9BRU9 249 aaKnown RBP13.57□□□□□ -0.24
CLCN1-201ENST00000343257 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
CLCN1-201ENST00000343257 FRMPD3Q5JV73 1810 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 PQLC2LA1A4F0 135 aa13.57□□□□□ -0.24
CLCN1-201ENST00000343257 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms