RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF229Q9UJW7 825 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 ARID1AO14497 2285 aa13.5□□□□□ -0.25
VAPA-201ENST00000340541 DSCAMO60469 2012 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 A0A1W2PR80 420 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 OR6C65A6NJZ3 312 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 J3KTA2 159 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 PRSS23O95084 383 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 IGF2P01344 180 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 IFNW1P05000 195 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 HSD17B1P14061 328 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 YAP1P46937 504 aaKnown RBP13.49□□□□□ -0.25
VAPA-201ENST00000340541 LSM11P83369 360 aaKnown RBP eCLIP13.49□□□□□ -0.25
VAPA-201ENST00000340541 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
VAPA-201ENST00000340541 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 ZP4Q12836 540 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 IFI44LQ53G44 452 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 GLYATQ6IB77 296 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 SSX8Q7RTT4 187 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 C17orf78Q8N4C9 275 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 LILRB1Q8NHL6 650 aaPredicted RBP13.49□□□□□ -0.25
VAPA-201ENST00000340541 TMEM239Q8WW34 195 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 IGFBPL1Q8WX77 278 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 GEMIN6Q8WXD5 167 aaKnown RBP13.49□□□□□ -0.25
VAPA-201ENST00000340541 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 CCL19Q99731 98 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 NGBQ9NPG2 151 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 NANSQ9NR45 359 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 MED29Q9NX70 200 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
VAPA-201ENST00000340541 ZNF587BE7ETH6 402 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 RPL36A-HNRNPH2H7BZ11 118 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 SLC43A1O75387 559 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ADORA3P0DMS8 318 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 PAX1P15863 534 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 TGFBR3Q03167 851 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ST3GAL3Q11203 375 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 PHYHD1Q5SRE7 291 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ADAM5Q6NVV9 412 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
VAPA-201ENST00000340541 CCDC197Q8NCU1 140 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 OR1K1Q8NGR3 316 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 LIPHQ8WWY8 451 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ZNF837Q96EG3 531 aaPredicted RBP13.48□□□□□ -0.25
VAPA-201ENST00000340541 HS6ST2Q96MM7 605 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 CDRT15Q96T59 188 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 EMC6Q9BV81 110 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 GSX2Q9BZM3 304 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 NELFAQ9H3P2 528 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 ESRP2Q9H6T0 727 aaKnown RBP13.48□□□□□ -0.25
VAPA-201ENST00000340541 GORASP2Q9H8Y8 452 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 UBTD1Q9HAC8 227 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 DCAF13Q9NV06 445 aaKnown RBP13.48□□□□□ -0.25
VAPA-201ENST00000340541 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 RNF115Q9Y4L5 304 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 PLCE1Q9P212 2302 aa13.48□□□□□ -0.25
VAPA-201ENST00000340541 SLC35F4A4IF30 521 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 KRT33AO76009 404 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 OR7A10O76100 309 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 LY6G6DO95868 133 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 T-ENOLP0DO92 83 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 CDH2P19022 906 aaPredicted RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 TCN1P20061 433 aaPredicted RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 AHCYP23526 432 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 MSX2P35548 267 aaPredicted RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 HIKESHIQ53FT3 197 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 SAMD4BQ5PRF9 694 aaKnown RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 Q71RC1 249 aaPredicted RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 FKBP9P1Q75LS8 142 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 C20orf196Q8IYI0 205 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 DEFB107AQ8IZN7 70 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 PIK3C3Q8NEB9 887 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 BCL2L2Q92843 193 aaPredicted RBP13.47□□□□□ -0.25
VAPA-201ENST00000340541 GPR35Q9HC97 309 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 RPS6KA6Q9UK32 745 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 MED31Q9Y3C7 131 aa13.47□□□□□ -0.25
VAPA-201ENST00000340541 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 HS3ST1O14792 307 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 CLOCKO15516 846 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 AKAP8O43823 692 aaKnown RBP13.46□□□□□ -0.25
VAPA-201ENST00000340541 SERPINI2O75830 405 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 CD3EP07766 207 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 IFNGR1P15260 489 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 FUT1P19526 365 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 ZNF83P51522 516 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 IQCCQ4KMZ1 466 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 CARD17Q5XLA6 110 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms