RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
USP47-202ENST00000339865 XKRY2A2RUG3 117 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 PSMB1P20618 241 aaKnown RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 CDKN2DP55273 166 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 B2MP61769 119 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NHLH1Q02575 133 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NHLH2Q02577 135 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 FOXC1Q12948 553 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 ZNF805Q5CZA5 627 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 ADGRG3Q86Y34 549 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 LGI3Q8N145 548 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NPAP1Q9NZP6 1156 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 BMP2P12643 396 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NPY1RP25929 384 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 RAD52P43351 418 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 OR10A3P58181 314 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NR0B2Q15466 257 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 UNC50Q53HI1 259 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 RPUSD3Q6P087 351 aaKnown RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 ZNF561Q8N587 486 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 OR8B4Q96RC9 309 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 ADAM29Q9UKF5 820 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 KIF26BQ2KJY2 2108 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 C5orf52A6NGY3 159 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 SSSCA1O60232 199 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 PMCHP20382 165 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 SRPXP78539 464 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 CORO6Q6QEF8 472 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 TIMM29Q9BSF4 260 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 CRLF2Q9HC73 371 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 MCTS1Q9ULC4 181 aaKnown RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 NME4O00746 187 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 MMP2P08253 660 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 SIM1P81133 766 aaPredicted RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 ZNF761Q86XN6 746 aaPredicted RBP11.96□□□□□ -0.49
USP47-202ENST00000339865 OR6V1Q8N148 313 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 ABHD6Q9BV23 337 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 MED20Q9H944 212 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 PTTG3PQ9NZH4 202 aa11.96□□□□□ -0.49
USP47-202ENST00000339865 TEX50A0A1B0GTY4 177 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 PCGF2P35227 344 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 SLC6A12P48065 614 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 MARCH8Q5T0T0 291 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 H2BFWTQ7Z2G1 175 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 COMMD6Q7Z4G1 85 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 OR51A4Q8NGJ6 313 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 OR51A2Q8NGJ7 313 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 POPDC3Q9HBV1 291 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 ZNF732B4DXR9 585 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 SH3BP2P78314 561 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 INPP5JQ15735 1006 aaPredicted RBP11.96□□□□□ -0.5
USP47-202ENST00000339865 GLIS1Q8NBF1 620 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 OR13D1Q8NGV5 346 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 APH1BQ8WW43 257 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 MYADMQ96S97 322 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 GPR88Q9GZN0 384 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 SCPEP1Q9HB40 452 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 CSAG2Q9Y5P2 127 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.5
USP47-202ENST00000339865 LEFTY1O75610 366 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 LGI1O95970 557 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 QDPRP09417 244 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF888P0CJ79 500 aaPredicted RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 OR5H8P0DN80 308 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 CD1DP15813 335 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SLC6A8P48029 635 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SHISA6Q6ZSJ9 500 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 PDZD3Q86UT5 571 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 OR2M3Q8NG83 312 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 OR1A1Q9P1Q5 309 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 hCG_1809904A0A1W2PP81 198 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PPE2 198 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PR64 198 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 A0A1W2PRV1 198 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 PMS2P1A4D2B8 440 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SOCS7O14512 581 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 LAMP1P11279 417 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 CALCRP30988 508 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ERVFC1-1P60608 527 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 PLAURQ03405 335 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 MLLT11Q13015 90 aaPredicted RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 CEACAM7Q14002 265 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 Q6ZTK2 550 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 LGALS14Q8TCE9 139 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 MRPS14O60783 128 aaKnown RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 ALDOAP04075 364 aaKnown RBP11.95□□□□□ -0.5
USP47-202ENST00000339865 C1orf61Q13536 156 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 OR4D1Q15615 310 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF528Q3MIS6 628 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZBTB44Q8NCP5 570 aa11.95□□□□□ -0.5
USP47-202ENST00000339865 ZNF689Q96CS4 500 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms