RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 CXCR1P25024 350 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 NXPH1P58417 271 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 PLCXD2Q0VAA5 305 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 EBPQ15125 230 aaKnown RBP17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FAM205BPQ63HN1 556 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 SLC35D2Q76EJ3 337 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FCRLAQ7L513 359 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 SLITRK4Q8IW52 837 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 SLC35F3Q8IY50 421 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF440Q8IYI8 595 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 OR11A1Q9GZK7 315 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FAM172BPA6NC97 362 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF879B4DU55 563 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 PIAS2O75928 621 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 HLA-DQA2P01906 255 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 HIST1H2ABP04908 130 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FCN2Q15485 313 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 HIST3H2AQ7L7L0 130 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 LINGO2Q7L985 606 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 OR51A4Q8NGJ6 313 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 PIGKQ92643 395 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 HIST1H2ACQ93077 130 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 NUDT22Q9BRQ3 303 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 TBL1XR1Q9BZK7 514 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF304Q9HCX3 659 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 FRRS1LQ9P0K9 344 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF281Q9Y2X9 895 aa17.18■□□□□ 0.34
RFTN1-201ENST00000334133 PRKCAP17252 672 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 FBLP22087 321 aaKnown RBP17.17■□□□□ 0.34
RFTN1-201ENST00000334133 RPS15P62841 145 aaKnown RBP17.17■□□□□ 0.34
RFTN1-201ENST00000334133 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 C17orf82Q86X59 251 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-201ENST00000334133 SLC19A3Q9BZV2 496 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 GTF2A1LQ9UNN4 478 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 RGS13O14921 159 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 UQCRC1P31930 480 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 SFRP4Q6FHJ7 346 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-201ENST00000334133 TEX19Q8NA77 164 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 NPAS1Q99742 590 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 LIN7BQ9HAP6 207 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 LAMP5Q9UJQ1 280 aa17.17■□□□□ 0.34
RFTN1-201ENST00000334133 ATXN7L1Q9ULK2 861 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-201ENST00000334133 IGKV3D-11A0A0A0MRZ8 115 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 FRG2CA6NGY1 282 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 DOK2O60496 412 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 FCER2P06734 321 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 NUDT1P36639 197 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 SLC35D3Q5M8T2 416 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 SLC43A2Q8N370 569 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 SLC25A45Q8N413 288 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 PPP1R14AQ96A00 147 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 CREB3L1Q96BA8 519 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 OMA1Q96E52 524 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 MS4A3Q96HJ5 214 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 VN1R1Q9GZP7 353 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 MAS1P04201 325 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 ABCD3P28288 659 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 FAPQ12884 760 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 ETFDHQ16134 617 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 TIGD4Q8IY51 512 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 AKAP1Q92667 903 aaKnown RBP eCLIP17.16■□□□□ 0.34
RFTN1-201ENST00000334133 GPX7Q96SL4 187 aaPredicted RBP17.16■□□□□ 0.34
RFTN1-201ENST00000334133 PELOQ9BRX2 385 aaKnown RBP17.16■□□□□ 0.34
RFTN1-201ENST00000334133 UPK3AO75631 287 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 UBL3O95164 117 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 SLC16A9Q7RTY1 509 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 FAM220AQ7Z4H9 259 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 EXD3Q8N9H8 876 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 CACNG6Q9BXT2 260 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 UCK1Q9HA47 277 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 ING3Q9NXR8 418 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 KCNG2Q9UJ96 466 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 SPATA2Q9UM82 520 aa17.16■□□□□ 0.34
RFTN1-201ENST00000334133 FREM3P0C091 2139 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 H0YC42 278 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 TCRBP04435 133 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 PLA2G7Q13093 441 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 COL19A1Q14993 1142 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 ELAVL1Q15717 326 aaKnown RBP17.15■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF684Q5T5D7 378 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 FAAP20Q6NZ36 180 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 DUSP19Q8WTR2 217 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 MAP6Q96JE9 813 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 LRFN5Q96NI6 719 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 FGF21Q9NSA1 209 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 ABRACLQ9P1F3 81 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 ZNF222Q9UK12 451 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 IFITM5A6NNB3 132 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 GATBO75879 557 aaKnown RBP17.15■□□□□ 0.34
RFTN1-201ENST00000334133 FBXO45P0C2W1 286 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 BTBD16Q32M84 506 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 CCDC92Q53HC0 331 aaPredicted RBP17.15■□□□□ 0.34
RFTN1-201ENST00000334133 LRRN1Q6UXK5 716 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 OR5AK2Q8NH90 309 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 WWTR1Q9GZV5 400 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 UBE2ZQ9H832 354 aaPredicted RBP17.15■□□□□ 0.34
RFTN1-201ENST00000334133 TAS2R5Q9NYW4 299 aa17.15■□□□□ 0.34
RFTN1-201ENST00000334133 EPHA6Q9UF33 1036 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms