RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 BORCS5Q969J3 196 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 SDCCAG3Q96C92 435 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 TSPAN32Q96QS1 320 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
SHOX-201ENST00000334060 FREM1Q5H8C1 2179 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 FAM208BQ5VWN6 2430 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 GJE1A6NN92 205 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 RNF13O43567 381 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 TRAF3IP2O43734 574 aaPredicted RBP14.69□□□□□ -0.06
SHOX-201ENST00000334060 OR2T1O43869 369 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 OSMP13725 252 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 ESRRGP62508 458 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 SLC35A1P78382 337 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 PUDPQ08623 228 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 PTGES3Q15185 160 aaKnown RBP14.69□□□□□ -0.06
SHOX-201ENST00000334060 EIF2S3LQ2VIR3 472 aaKnown RBP14.69□□□□□ -0.06
SHOX-201ENST00000334060 ALG10Q5BKT4 473 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 ABLIM2Q6H8Q1 611 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 TUSC5Q8IXB3 177 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 CDK20Q8IZL9 346 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 RNF128Q8TEB7 428 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 HTRA1Q92743 480 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 Q96M85 177 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 TSSK6Q9BXA6 273 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 ASPNQ9BXN1 380 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 IL20Q9NYY1 176 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 TMEM5Q9Y2B1 443 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 ZNF835Q9Y2P0 537 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 CDH10Q9Y6N8 788 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 FLNCQ14315 2725 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 PCNX1Q96RV3 2341 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 LINC01387J3KSC0 135 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 BHLHE40O14503 412 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 MT-ATP6P00846 226 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 IFNGR1P15260 489 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 GTF2E2P29084 291 aaKnown RBP14.69□□□□□ -0.06
SHOX-201ENST00000334060 CLK1P49759 484 aaKnown RBP14.69□□□□□ -0.06
SHOX-201ENST00000334060 MAP2K6P52564 334 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 CTXN1P60606 82 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 SLC17A1Q14916 467 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 RFX4Q33E94 735 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 CD300LDQ6UXZ3 194 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 C17orf50Q8WW18 174 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 FN3KQ9H479 309 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 GPR52Q9Y2T5 361 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 IER3IP1Q9Y5U9 82 aa14.69□□□□□ -0.06
SHOX-201ENST00000334060 DOCK7Q96N67 2140 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 OR14I1A6ND48 311 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 SLC22A20A6NK97 555 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 IGHV3-9P01782 118 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 EDN3P14138 238 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 CRISP1P54107 249 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 CSNK2A1P68400 391 aaPredicted RBP14.68□□□□□ -0.06
SHOX-201ENST00000334060 NPRL3Q12980 569 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 GINS1Q14691 196 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 ACKR1Q16570 336 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 ZNF362Q5T0B9 420 aaPredicted RBP14.68□□□□□ -0.06
SHOX-201ENST00000334060 EEF1A1P5Q5VTE0 462 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 CARD17Q5XLA6 110 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 TMEM225Q6GV28 225 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 PTCHD4Q6ZW05 846 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 FAM122BQ7Z309 247 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 NUFIP2Q7Z417 695 aaKnown RBP14.68□□□□□ -0.06
SHOX-201ENST00000334060 TSPAN14Q8NG11 270 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 CPNE4Q96A23 557 aaPredicted RBP14.68□□□□□ -0.06
SHOX-201ENST00000334060 IFT27Q9BW83 186 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 HCAR1Q9BXC0 346 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 GRIP2Q9C0E4 1043 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 OSGIN2Q9Y236 505 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 POFUT2Q9Y2G5 429 aa14.68□□□□□ -0.06
SHOX-201ENST00000334060 TEX13CA0A0J9YWL9 993 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 E9PQ18 207 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 IGF2P01344 180 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 GNLYP22749 145 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 RPL4P36578 427 aaKnown RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 IFNGR2P38484 337 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 SELENOPP49908 381 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 SIRPAP78324 504 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 MESTQ5EB52 335 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 PHYHD1Q5SRE7 291 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 CYB561A3Q8NBI2 242 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 OR9K2Q8NGE7 335 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 ZNF420Q8TAQ5 688 aaPredicted RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 ZNRF4Q8WWF5 429 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 INTS12Q96CB8 462 aaKnown RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 GABARAPL3Q9BY60 117 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 ZNF556Q9HAH1 456 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 SMPD3Q9NY59 655 aaPredicted RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 IGKV1D-43A0A0B4J1Z2 117 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 CYTIPO60759 359 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 NDUFB2O95178 105 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 HIST1H2ABP04908 130 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 FOXG1P55316 489 aaPredicted RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 RASGEF1BQ0VAM2 473 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 ZNF829Q3KNS6 432 aaPredicted RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 VWA1Q6PCB0 445 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 C5orf46Q6UWT4 87 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 HIST3H2AQ7L7L0 130 aa14.67□□□□□ -0.06
SHOX-201ENST00000334060 LSM14AQ8ND56 463 aaKnown RBP14.67□□□□□ -0.06
SHOX-201ENST00000334060 OR6S1Q8NH40 331 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms