RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OR5M10Q6IEU7 315 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 CBLN3Q6UW01 205 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 DPY19L2P2Q6ZN68 376 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 FCAMRQ8WWV6 532 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 ELMOD3Q96FG2 381 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 RBM18Q96H35 190 aaKnown RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 OR1F2PQ96R84 312 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 C7orf50Q9BRJ6 194 aaKnown RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 NMNAT2Q9BZQ4 307 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 MRM2Q9UI43 246 aaKnown RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 FBXL21Q9UKT6 434 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 MMP17Q9ULZ9 603 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 OR10H1Q9Y4A9 318 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 NPTNQ9Y639 398 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 AUP1Q9Y679 476 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 THADAQ6YHU6 1953 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 RAG2P55895 527 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 YPEL5P62699 121 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 C2orf68Q2NKX9 166 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 TMPRSS12Q86WS5 348 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 C16orf52Q8NHV5 167 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 LMF2Q9BU23 707 aaKnown RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 DIABLOQ9NR28 239 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 RXFP3Q9NSD7 469 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 WDFY3Q8IZQ1 3526 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 A0A0J9YY10 115 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 NPIPB9F8W1W9 429 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 OR7A10O76100 309 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 TNFP01375 233 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 IFNA7P01567 189 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 CD226Q15762 336 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 TMEM65Q6PI78 240 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 LRRC69Q6ZNQ3 347 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.22□□□□□ -0.61
VPS33B-201ENST00000333371 GLB1L2Q8IW92 636 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 SLC22A18ASQ8N1D0 253 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 UXS1Q8NBZ7 420 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 OR13H1Q8NG92 308 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 NANSQ9NR45 359 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 TAS2R10Q9NYW0 307 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 KCNN3Q9UGI6 736 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 IKZF2Q9UKS7 526 aa11.22□□□□□ -0.61
VPS33B-201ENST00000333371 UPK3AO75631 287 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 GLCEO94923 617 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 PROS1P07225 676 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ITPKBP27987 946 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 CBFBQ13951 182 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 OPCMLQ14982 345 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 POMZP3Q6PJE2 187 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF550Q7Z398 422 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 LSM14AQ8ND56 463 aaKnown RBP11.21□□□□□ -0.61
VPS33B-201ENST00000333371 HOXB13Q92826 284 aaPredicted RBP11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ATOH1Q92858 354 aaPredicted RBP11.21□□□□□ -0.61
VPS33B-201ENST00000333371 S100A16Q96FQ6 103 aaKnown RBP11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ADAD1Q96M93 576 aaKnown RBP11.21□□□□□ -0.61
VPS33B-201ENST00000333371 SFXN2Q96NB2 322 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 WDR76Q9H967 626 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 TCF7L1Q9HCS4 588 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 POLE3Q9NRF9 147 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF337Q9Y3M9 751 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 COL4A2P08572 1712 aa11.21□□□□□ -0.61
VPS33B-201ENST00000333371 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 SERINC4A6NH21 518 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 PYCARD-AS1I3L0S3 204 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 GPRIN2O60269 458 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 IGFBP4P22692 258 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 GPR143P51810 404 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 EFNB2P52799 333 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 TAS2R20P59543 309 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 CTXN1P60606 82 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 GUCA2AQ02747 115 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 LTBQ06643 244 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 GAS6Q14393 721 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF141Q15928 474 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 CSRP2Q16527 193 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 CLLU1Q5K131 121 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 FAM69AQ5T7M9 428 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 FAM198BQ6UWH4 519 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 BAIAP2L2Q6UXY1 529 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 GLDNQ6ZMI3 551 aaPredicted RBP11.21□□□□□ -0.62
VPS33B-201ENST00000333371 MEIOBQ8N635 442 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF321PQ8N8H1 164 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 AMELYQ99218 206 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 TWSG1Q9GZX9 223 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 PLEKHA1Q9HB21 404 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 PTTG3PQ9NZH4 202 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 CYP8B1Q9UNU6 501 aa11.21□□□□□ -0.62
VPS33B-201ENST00000333371 A0A1W2PPL8 197 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms