RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KANSL1Q7Z3B3 1105 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 RABEPKQ7Z6M1 372 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 SYT9Q86SS6 491 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 SLC38A9Q8NBW4 561 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 RPS4Y2Q8TD47 263 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 MED30Q96HR3 178 aa15.77■□□□□ 0.12
DDX28-201ENST00000332395 IGLV3-12A0A075B6K2 115 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 PRKAR1AP10644 381 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 PNLIPP16233 465 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 ACY1Q03154 408 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 GPR139Q6DWJ6 353 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 MZT2BQ6NZ67 158 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 TIGD4Q8IY51 512 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 OR2T4Q8NH00 348 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 OR6C1Q96RD1 312 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 RNF121Q9H920 327 aa15.77■□□□□ 0.11
DDX28-201ENST00000332395 RANGRFQ9HD47 186 aaPredicted RBP15.77■□□□□ 0.11
DDX28-201ENST00000332395 RBFOX1Q9NWB1 397 aaKnown RBP15.77■□□□□ 0.11
DDX28-201ENST00000332395 TMEM72A0PK05 275 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 OR6C70A6NIJ9 312 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 FLRT2O43155 660 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 LYRM1O43325 122 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 INPP1P49441 399 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 QPRTQ15274 297 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 NR0B2Q15466 257 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 CEP78Q5JTW2 689 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 OR6V1Q8N148 313 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ZC3HAV1LQ96H79 300 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 FRMD6Q96NE9 622 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 FYTTD1Q96QD9 318 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 MESP1Q9BRJ9 268 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 PTDSS2Q9BVG9 487 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 TAS2R5Q9NYW4 299 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 NUFIP1Q9UHK0 495 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 KLHDC2Q9Y2U9 406 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 LY6G6EA0A0G2JKS1 128 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ERVH48-1M5A8F1 160 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 SUSD5O60279 629 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 TIAF1O95411 115 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 RENP00797 406 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ANKRD34CP0C6C1 535 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 EPXP11678 715 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ATF1P18846 271 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 PITPNBP48739 271 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 POLR2HP52434 150 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 P2RX3P56373 397 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 NANOS3P60323 173 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 SQSTM1Q13501 440 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 SF3A2Q15428 464 aaKnown RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 HSD17B12Q53GQ0 312 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 SLC6A19Q695T7 634 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 C16orf47Q6ZP98 133 aaPredicted RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 DTX3Q8N9I9 347 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ANGPTL6Q8NI99 470 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 RNF166Q96A37 237 aaPredicted RBP15.76■□□□□ 0.11
DDX28-201ENST00000332395 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 SYT4Q9H2B2 425 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 ZCCHC4Q9H5U6 513 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 U3KQA8 63 aa15.76■□□□□ 0.11
DDX28-201ENST00000332395 TMED7-TICAM2A0A0A6YYA0 188 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 A0A1B0GVC2 190 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 A0A1W2PQM1 296 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 A6NIN4 97 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 MT-ATP6P00846 226 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 FOSL2P15408 326 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 NKAIN1Q4KMZ8 207 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 SIGIRRQ6IA17 410 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 PLET1Q6UQ28 207 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 UNQ9370/PRO34162Q6UXP9 181 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 OVCH1Q7RTY7 1134 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 MAMDC2Q7Z304 686 aaPredicted RBP15.75■□□□□ 0.11
DDX28-201ENST00000332395 FAM220AQ7Z4H9 259 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ANKRD37Q7Z713 158 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 APCDD1LQ8NCL9 501 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 GPR119Q8TDV5 335 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 DUSP19Q8WTR2 217 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 SLC25A36Q96CQ1 311 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ADAD1Q96M93 576 aaKnown RBP15.75■□□□□ 0.11
DDX28-201ENST00000332395 GON7Q9BXV9 100 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 SEMA4CQ9C0C4 833 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDX28-201ENST00000332395 IRF2BPLQ9H1B7 796 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ZNF281Q9Y2X9 895 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 TMED7Q9Y3B3 224 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 PCNX3Q9H6A9 2034 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 A0A0B4J293 547 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 A0A1B0GTQ1 180 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 TVP23AA6NH52 213 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ZNF879B4DU55 563 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 C11orf98E9PRG8 122 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ADAM10O14672 748 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 ARHGEF9O43307 516 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 FZD7O75084 574 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 HEXBP07686 556 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 OR8G3PP0DMU2 310 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 PSKH1P11801 424 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 CCL7P80098 99 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 SGCBQ16585 318 aa15.75■□□□□ 0.11
DDX28-201ENST00000332395 FAM69AQ5T7M9 428 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms