RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 OR8K3Q8NH51 312 aa13.2□□□□□ -0.3
SNX20-202ENST00000330943 Q96M85 177 aa13.2□□□□□ -0.3
SNX20-202ENST00000330943 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 STARP49675 285 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 EMDP50402 254 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 RUNX2Q13950 521 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 Q499Y3 187 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 TMEFF1Q8IYR6 380 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 NPEPL1Q8NDH3 523 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 DVL3Q92997 716 aaPredicted RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 DUSP22Q9NRW4 184 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 SLC6A5Q9Y345 797 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 ENTPD2Q9Y5L3 495 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 H0YC42 278 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 ABCD4O14678 606 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 XRCC3O43542 346 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 CSF1P09603 554 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 UBBP0CG47 229 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 TLX1P31314 330 aaPredicted RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 PPM1AP35813 382 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 RPS27AP62979 156 aaKnown RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 UBA52P62987 128 aaKnown RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 CDRT4Q8N9R6 151 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 RPS4Y2Q8TD47 263 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 APMAPQ9HDC9 416 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 RASL12Q9NYN1 266 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 TICRRQ7Z2Z1 1910 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 FRYLO94915 3013 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 MPTX1A8MV57 137 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 BRINP1O60477 761 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 EPCAMP16422 314 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 ZNF511Q8NB15 262 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 RNF166Q96A37 237 aaPredicted RBP13.19□□□□□ -0.3
SNX20-202ENST00000330943 SLC25A28Q96A46 364 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 ZNF426Q9BUY5 554 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
SNX20-202ENST00000330943 MUC3AQ02505 3323 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TRAV8-7A0A075B6U6 113 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 RFPL4AA6NLU0 287 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 C4orf47A7E2U8 309 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 GRXCR1A8MXD5 290 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 RFPL4AL1F8VTS6 287 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 SLC35G6P0C7Q6 338 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 MGMTP16455 207 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 EFNB2P52799 333 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 MPPED2Q15777 294 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 ODF4Q2M2E3 257 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 USP53Q70EK8 1073 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 FAM220AQ7Z4H9 259 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 GRASPQ7Z6J2 395 aaPredicted RBP13.18□□□□□ -0.3
SNX20-202ENST00000330943 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TMEM17Q86X19 198 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 OR5T2Q8NGG2 359 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 LRFN5Q96NI6 719 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TEX101Q9BY14 249 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TMEM185BQ9H7F4 350 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 ZNF230Q9UIE0 474 aaPredicted RBP13.18□□□□□ -0.3
SNX20-202ENST00000330943 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
SNX20-202ENST00000330943 SLC27A6Q9Y2P4 619 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 ZNF98A6NK75 572 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TMEM127O75204 238 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 PAK4O96013 591 aaPredicted RBP13.18□□□□□ -0.3
SNX20-202ENST00000330943 ADH1CP00326 375 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 CD3DP04234 171 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
SNX20-202ENST00000330943 IRF4Q15306 451 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 MYADMQ96S97 322 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 FBXL21Q9UKT6 434 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
SNX20-202ENST00000330943 TRAV18A0A075B6X5 111 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 TMEM72A0PK05 275 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 SIGLEC6O43699 453 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 EGFP01133 1207 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 VIPR2P41587 438 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 LUMP51884 338 aaPredicted RBP13.17□□□□□ -0.3
SNX20-202ENST00000330943 FGL1Q08830 312 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 LIPNQ5VXI9 398 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 TMEM185AQ8NFB2 350 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
SNX20-202ENST00000330943 TSSK2Q96PF2 358 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms