RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OMA1Q96E52 524 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 MAP6Q96JE9 813 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 NDEL1Q9GZM8 345 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 VN1R1Q9GZP7 353 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 MCUBQ9NWR8 336 aa13.21□□□□□ -0.29
TPM3-206ENST00000330188 TVP23AA6NH52 213 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 PDCD5O14737 125 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 EIF4E2O60573 245 aaKnown RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 WISP1O95388 367 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 TACSTD2P09758 323 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 ITPKBP27987 946 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 ABCD3P28288 659 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 ALKBH1Q13686 389 aaKnown RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 EFR3AQ14156 821 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 RNASE12Q5GAN4 147 aaKnown RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 UBE2NLQ5JXB2 153 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 LIPNQ5VXI9 398 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 BICRALQ6AI39 1079 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 GPR139Q6DWJ6 353 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 POMZP3Q6PJE2 187 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 BAIAP2L2Q6UXY1 529 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 FAM220AQ7Z4H9 259 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 ZNF441Q8N8Z8 693 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 OR2T4Q8NH00 348 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 CMTM3Q96MX0 182 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 ZFP3Q96NJ6 502 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.3
TPM3-206ENST00000330188 TSPAN10Q9H1Z9 355 aaPredicted RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 MRPS7Q9Y2R9 242 aaKnown RBP13.21□□□□□ -0.3
TPM3-206ENST00000330188 SEC16AO15027 2179 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 PCNX3Q9H6A9 2034 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 ASXL3Q9C0F0 2248 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 RP1P56715 2156 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 TRAV36DV7A0A075B6V5 113 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 A0A1B0GX78 115 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 FAM47E-STBD1D6RA91 191 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 CDC40O60508 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
TPM3-206ENST00000330188 RENP00797 406 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 ADRB1P08588 477 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 GLB1P16278 677 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
TPM3-206ENST00000330188 HES5Q5TA89 166 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 EEF1A1P5Q5VTE0 462 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 C1QL3Q5VWW1 255 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 SLC25A45Q8N413 288 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 ADAMTS14Q8WXS8 1223 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 AKAP1Q92667 903 aaKnown RBP eCLIP13.2□□□□□ -0.38e-7■■■■□ 24.6
TPM3-206ENST00000330188 ZNF501Q96CX3 271 aaPredicted RBP13.2□□□□□ -0.3
TPM3-206ENST00000330188 DNAJA3Q96EY1 480 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 TAS2R5Q9NYW4 299 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 FRRS1LQ9P0K9 344 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
TPM3-206ENST00000330188 IFITM5A6NNB3 132 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.19□□□□□ -0.3
TPM3-206ENST00000330188 AIPO00170 330 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 CTDSPLO15194 276 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
TPM3-206ENST00000330188 ITGA10O75578 1167 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 AKR7A3O95154 331 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 GIMD1P0DJR0 217 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PRKCAP17252 672 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PGCP20142 388 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PNLIPRP2P54317 469 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 STARD6P59095 220 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 GPLD1P80108 840 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 Q5BKY6 102 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 FAM199XQ6PEV8 388 aaPredicted RBP13.19□□□□□ -0.3
TPM3-206ENST00000330188 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PRSS42Q7Z5A4 293 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 SIAH3Q8IW03 269 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PTDSS2Q9BVG9 487 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 SYT4Q9H2B2 425 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 DPAGT1Q9H3H5 408 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 LAMP5Q9UJQ1 280 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 UNC13CQ8NB66 2214 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 A0A0A6YYJ9 748 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 ARHGEF9O43307 516 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 NUDT14O95848 222 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 GP1BBP13224 206 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 DPP4P27487 766 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 FAPQ12884 760 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 MRPL28Q13084 256 aaKnown RBP13.19□□□□□ -0.3
TPM3-206ENST00000330188 PRSS45Q7RTY3 260 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 PM20D2Q8IYS1 436 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
TPM3-206ENST00000330188 BMPERQ8N8U9 685 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
TPM3-206ENST00000330188 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms